Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03020 |
Symbol | |
ID | 8385640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 298493 |
End bp | 299557 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974403 |
Product | cysteine synthase |
Protein accession | YP_003132211 |
Protein GI | 257054379 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.675076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGACG CGTGGGTGCG GAATGCCATC CGCATCATCG AGGCCGACGC CAACCGCAGC GCCGACACCC ACCTGCATGT CTTCCCCCTG CCTCCCGAAT GGGGCATCGA CCTGTACCTG AAGGACGAGT CCGTACATCC CACGGGTTCG CTCAAGCACC GACTGGCCCG GTCGTTGTTG CTGTACGGCC TGGTGAACGG GCGGATCGGC CCCGACACGG TGCTCGTGGA GGCGTCGAGC GGGTCCACCG CGGTGTCGGA AGCGTACTTC GCCCGCATGC TCGGGCTGGA GTTCGTCACC GTCGTGCCAC GCAACACCAG CCAGGAGAAG ATCGACCTCA TCGAGTTCTA CGGTGGTCGG TGCCACTTCG TCGACCGGCC ACCGGACATG TACACCGAGG CCGAGCGTCT CGCCGCGGAA TGCAACGGCC ACTATCTCGA CCAGTTCACC TATGCCGAAC GGGCCACCGA CTGGCGGGGC AACAACAACA TCGCCGAGTC GGTGTTCACG CAACTGCGGT CGGAACGGCA CCCGATCCCG ACGTGGATCG TGGTGGGGGC CGGCACCGGG GGAACGAGCG CGACCTTCGG GCGTTACGTG CGTTACCGCA GGCACAACAC CCGCATCGCG GTGGTCGACC CGGAGAACTC CGCGTTCTAC GGTGCGTGGC AGACGGGGGA GCGGGACTAC CAGACGGGTA TGCCGTCACG GATCGAGGGC ATCGGACGTC CGAGGGTGGA ACCGTCGTTC ATCCCCGAGG TGATCGACGA GATGATCCAG GTGCCCGACG CCGCGTCCCT GGCGGCGATC CGGTTCCTCC GGCAGCGCAC GGGTCATTGG GCGGGCGGTT CGACCGGGAC GAACCTCTAC GGCGCCTTCA CCCTCATCTC GCGGATGTTG GCCAACGGTG AGCGGGGCAG CGTGGTGACA CTGTTGTGCG ACGGTGGTGA ACGCTACGCC GGGACGTACT ACAACGACGC TTGGCTCGCC GAACACGGTC TGGACATCGA ACCGTATCTG AAGGCGTTCG ACCGCTTTCT GGAGACGGGT GTGTTCCCGG GCTGA
|
Protein sequence | MNDAWVRNAI RIIEADANRS ADTHLHVFPL PPEWGIDLYL KDESVHPTGS LKHRLARSLL LYGLVNGRIG PDTVLVEASS GSTAVSEAYF ARMLGLEFVT VVPRNTSQEK IDLIEFYGGR CHFVDRPPDM YTEAERLAAE CNGHYLDQFT YAERATDWRG NNNIAESVFT QLRSERHPIP TWIVVGAGTG GTSATFGRYV RYRRHNTRIA VVDPENSAFY GAWQTGERDY QTGMPSRIEG IGRPRVEPSF IPEVIDEMIQ VPDAASLAAI RFLRQRTGHW AGGSTGTNLY GAFTLISRML ANGERGSVVT LLCDGGERYA GTYYNDAWLA EHGLDIEPYL KAFDRFLETG VFPG
|
| |