Gene Svir_02800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02800 
Symbol 
ID8385618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp278703 
End bp279830 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID644974381 
Producthypothetical protein 
Protein accessionYP_003132189 
Protein GI257054357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCGG AGGCGGTGAG CCGAGCGGCA TGGTTCCGCA CCCGCAGACG TGACGACGAA 
CGGTTCGCCC GCGCCGTCGA GTCCGGGAGC GACTCGGACT CCTTCGGCGC CGAACTCGCC
GTCGTCGCGG CACTGCGCAG GCTCGGTGAC TCCGTCACCG TCGACGACCG GGCCCGGGAA
CGCATCGTCC GGCGGATAGT CGCCTCGCCC CCGCGTCCCC GTCCCCGCGC CCGACTCCGA
CCGGCGGCCC TCCTCGCCGG CCTGTTCTCC CTGGTCGTCG CGCTGACCGG CCTGGGAACG
GCACTCGCGC AGAACGCGCT CCCCGGCGAA CCGCTCTACC ACCTCAAACT CGTCCAGGAG
ACCGTCACGC TGGGACTCAC CTTCGACGCC GAGGACGACG CCGTACGCAG GCTCTCCTAC
GCCTCCCGAC GCCTCGACGA GATGACCGAA CTGGGCCGAC ACGAAGGCCC CGACGACAGC
GACGAGGACG GCTACCAGCT CGCCCTGCGG GAGTTCACCG CGCACGCCAC CGAGGGCACG
TCCCGGCTCA CCGCGCTGGC CACTCGCTCC GACACACGAC TGCTGTCCGT GTTGTCGTCC
TGGGCCCGAC GGGAATCCAC CCGGCTCGAC ACGCTCATCC CCGCCCTACC CGCCACGGTG
GGTGACGACC TCGGCACCCT GCTCCAGCGC ATCGAACGCC GCGCCACGGC GCTGTCCGCA
CGCATGGACT GCTACGAGAT CACCTCGGCG ACCACCGACG ATCTCGGCGC CCTCCCCGCC
ACGAGCGGGT GCGCCGCCCC ATCGCCTCTT CCGCAGCACA CCGACAAGCC GCACACCCGG
CCCTCCATCC CGGCCAAGCG GAAGGAACAC ACACCACCCC GGGACGTACC GGCACCGGAA
CACCGCCGGG CTTCGATGGC GATCCCGTAC GACACGCCGG AACAGTCCCG CCGCCCCGTC
CAGCCCGAGG GCTCCCTCGA TCCCACCGAC GTGGCACCAC CACCCACCGT GCCCGCGCCC
GTCCCAGCCC CCACCCGGGC GCGCCTCCCC GACTCGTCAC CCGAGGAACC CCCGCTGCTG
AGCATCGCCC CGCTCCTGCC GGGATTGCCC GCCGTGACGA TCGGATAG
 
Protein sequence
MEAEAVSRAA WFRTRRRDDE RFARAVESGS DSDSFGAELA VVAALRRLGD SVTVDDRARE 
RIVRRIVASP PRPRPRARLR PAALLAGLFS LVVALTGLGT ALAQNALPGE PLYHLKLVQE
TVTLGLTFDA EDDAVRRLSY ASRRLDEMTE LGRHEGPDDS DEDGYQLALR EFTAHATEGT
SRLTALATRS DTRLLSVLSS WARRESTRLD TLIPALPATV GDDLGTLLQR IERRATALSA
RMDCYEITSA TTDDLGALPA TSGCAAPSPL PQHTDKPHTR PSIPAKRKEH TPPRDVPAPE
HRRASMAIPY DTPEQSRRPV QPEGSLDPTD VAPPPTVPAP VPAPTRARLP DSSPEEPPLL
SIAPLLPGLP AVTIG