Gene Svir_02710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02710 
Symbol 
ID8385609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp269542 
End bp271284 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content72% 
IMG OID644974372 
Producthypothetical protein 
Protein accessionYP_003132180 
Protein GI257054348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAGC TCCTCGCCGA GCATGGCGGA CAGCTCGGTG GCACACCGCG CCGCCGGCGG 
CGTCGCGCTG CCGAGGATGG CGACGCGTCC GGCGGCCGTC AGCCTGGGAT CGCCGACACG
GCTCCACAGG CGATCATCGA ACGGGTTCGC GCCGAGGGGG CGTCCTCCGG ATCGACCTCC
CGCAGCGGTG GTCGCCCGAA CGGGCGGGCC CAGGCCGGCG ACGAAGCGCG CCGGGGACGT
CCCGGGCAGC CCCGTACGGG ACCGCAGAAG TTGCCGCCCC GGCCTCCGCA GGGCTCGGGT
TCCTACCCCG TTCCCGGCGG TGAGGACGTT GGGCGGCCGC CGTTGCCGCC ACGCGGCCGC
GGCGCGCGGC CCACTGGTGC GTCGGGTTCC CTGCCGGTCA CACCTCCTGC GCCGCAGTCG
AGCCTTCCTC CCAGCAACAC CCACAGCACC GGGTACGGCA AGCCGGTGGC CAACGGTTTC
CGTCCACCGC AGAACACCGG TTCCCATCCG GCGCCTCCGC CCGGTGGTGG TGCCGTCTCG
GGTGTGGTGC AGCAGTCGGC CGGATCCGGG GCGCAGCAAC CCCCGCAGCC CAACCAGGGG
CCACCGCGTG ATGTCGCGGA GCGGATGAAC GCCACTCGCC GGGTCCCCGC ACCGGTGCCG
CCACCGCCGC AGGCGGGCAC GCAGGAGGGG ACGTTGGCCG CTCGGCTCGA CGGCCTCGAC
GACGTCGACG AGTCGGGTGT CCAGCAGCCC GCCCAGCCCG GAGGCCCGGC CTCTCAGCAG
GGTGGTCGTG CGCAGCGTTC CGGTGCCTTC CCGATGCCGC ACAGGCGTAG GCCGCCGAGG
ACGGCGCCCG CTGTGCCGCC GGAGCCCAGC ACCGAGCAGT TCCCCGCCGT CGCGGAAAGC
GACGCGGAGA AGACCGCGTT GGCCGAGCCC GTGCGGGACG AGGAGAAAAC GACGCTGTCC
GAGGCCGTAC GCCCGGACGA GCCGCCCGCG GGATTGTCGA ACTGGCCGGG CGCTCGCGGT
GACGGCCAGT CGGTCGACTC GTCGAACGAG GCCACACAGG TCGGGGTGGC CGCCGTGCTG
AACTCCGATG ACGACGATGA CGACGACCAC GGGCCGGCCA CGGGGCACTA CGTGCCCAAT
TTCGACGACG ATGACGAGGA CGACGACTTC GACGGGCTGC GTCACCGGAC CGGTGTGCTC
GGTGACGATC CACTCGGCGA GGACGACGAT TTCGACGACC ACGGCACGCG GTACGCCGAC
TACGACGACG AGTCGTACCC CGATATGTAT GCGGGCAACC CGTACGCCGA CGATGACGAC
GACGAACCCG ACTCGGACTC CGACGATGCT GGTTCCGCCG AGGAGGAGGA ACCCAAGAAA
CGGAGGTTCC GCAAGGCACG CCGGGCCGAG CCCGTGGCCG CCGACTCCGA GGACGCCGAT
GAAGACGACG GCGATGCCGA CGATTCCGAG CTGGGCGATT CACCCGCCAA GCAGTGGCTC
GTGCTTGCCG GGCAGCTCGC GCTCGGTGTG GCCGGTGGTG CCGGGGTGTG GCTGGGCTTC
AATTGGCTGT GGGGCCGGTT GCCCGCCGCC GCGCTGATCG CGGCCCTGGT GGTCACCGTC
GGGCTCGTGT GGGTGGTGCG CAAGGTGCGA AGGGCGGAGG ACACCCAGAC CACCGTGCTC
GCGCTGCTCG TCGGGTTGGT GGTCACCGTG TCGCCCGCGG CGTTGTTACT GGTGTCGCGC
TAG
 
Protein sequence
MAELLAEHGG QLGGTPRRRR RRAAEDGDAS GGRQPGIADT APQAIIERVR AEGASSGSTS 
RSGGRPNGRA QAGDEARRGR PGQPRTGPQK LPPRPPQGSG SYPVPGGEDV GRPPLPPRGR
GARPTGASGS LPVTPPAPQS SLPPSNTHST GYGKPVANGF RPPQNTGSHP APPPGGGAVS
GVVQQSAGSG AQQPPQPNQG PPRDVAERMN ATRRVPAPVP PPPQAGTQEG TLAARLDGLD
DVDESGVQQP AQPGGPASQQ GGRAQRSGAF PMPHRRRPPR TAPAVPPEPS TEQFPAVAES
DAEKTALAEP VRDEEKTTLS EAVRPDEPPA GLSNWPGARG DGQSVDSSNE ATQVGVAAVL
NSDDDDDDDH GPATGHYVPN FDDDDEDDDF DGLRHRTGVL GDDPLGEDDD FDDHGTRYAD
YDDESYPDMY AGNPYADDDD DEPDSDSDDA GSAEEEEPKK RRFRKARRAE PVAADSEDAD
EDDGDADDSE LGDSPAKQWL VLAGQLALGV AGGAGVWLGF NWLWGRLPAA ALIAALVVTV
GLVWVVRKVR RAEDTQTTVL ALLVGLVVTV SPAALLLVSR