Gene Svir_02610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02610 
Symbol 
ID8385599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp259859 
End bp260353 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content68% 
IMG OID644974362 
ProductProtein of unknown function (DUF2505) 
Protein accessionYP_003132170 
Protein GI257054338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.344177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC GGATCGAGCA TCGCGCCACG TTCGCGCACG ACACCGCCGA CGTCTACGCC 
GCGCAGACCG ACGAGCAGGC TTTGCGCGCG CGGCTGGAGC GGCTCGGGGG CAAACACGCT
GAGCTGCGCG AACACGTGGT GACCGAAAGC GGTGTCCGGT ACACACTGAG CCAAGGCATC
GCCGCCGACA AGCTGCCGTC GCTGGTGCGG AGCCTCCACT CCGGGGACCT GATCGTGCGA
CGCGAACACG TCTGGACCGA CCTGGGTGAC CGCTACACCG GGACGATCGC CGTGGCGGTC
TCCGACGTCC CCGGTCGGAT CACGGCCGAC GTCGAACTCG CACCGAGCGC CGACGGGTGT
ACGCAGCTCA CCCGTGGTGA AGTGGCCGTG CGCATCCCCC TCGTCGGCGG CAAGATCGAG
AGCTTCGTCG TGGACCAGGT GACGAGGCTG CTCGAAACCG AGACCGACTT CACCAAGCAG
TGGCTCGCGC GCTGA
 
Protein sequence
MATRIEHRAT FAHDTADVYA AQTDEQALRA RLERLGGKHA ELREHVVTES GVRYTLSQGI 
AADKLPSLVR SLHSGDLIVR REHVWTDLGD RYTGTIAVAV SDVPGRITAD VELAPSADGC
TQLTRGEVAV RIPLVGGKIE SFVVDQVTRL LETETDFTKQ WLAR