Gene Svir_02470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02470 
Symbol 
ID8385585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp248426 
End bp249088 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID644974348 
Productpredicted nucleoside kinase, CMP and AMP kinase 
Protein accessionYP_003132156 
Protein GI257054324 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.600513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGATC TCAAGATCTG CCCGGCCTGC GGTGATCGGG CGCAGCGGCC GGCCGTGGAG 
GAGGAGCGGC TGGTGTGCGC GGCGTGTGGT CATCGCGCCG CGTTCCACCG GCTGCCCCTG
TTCGCGCTGA CCGGTCCCAG CGGTGGTGGC AAGTCCACGG TGGGGCCCGA GCTCGCCCGC
AGACTCTCGG GCGAGGTGGT GGTGTTGGAG CAGGACGTCC TGTGGACGGG CGGGCTGCGC
GACGACGTCG ACGGGCATCC GCGATTCCGG TCGACCTGGT TGCGGATGGC GGCGATGATC
CACCAGAGCG GGCGGCCGGT GGTGCTGTGC GGAACGGTGG TCCCACCCGA GTTCGAGCCG
CTGCCGGAGC GGGTGTTCTT CGCCGACATC CACTATCTGG CCCTCGTGGC CGAGCCCGAG
GTGTTGACTC GGCGATTGCG GGCCCGTCCC GCGTGGCGGG GGTGGGACGA ACCGCGGATC
GCGGAGATGT TGGAGTTCAC CGAGTGGTTG CGGCGGGAAG CGGCGGGGAT GTCCCCTCCC
GTGGAGTTGT TCGACACGAC CGAGGCGTCG TTGACTGAAT CGGTCGATCA CGTCGAGCGC
TGGGTGCGGC GGGGACTCGC CGCTCACCGG GCCTCCGAAG CCGTTCGAGT GGGCGCCGAC
TGA
 
Protein sequence
MLDLKICPAC GDRAQRPAVE EERLVCAACG HRAAFHRLPL FALTGPSGGG KSTVGPELAR 
RLSGEVVVLE QDVLWTGGLR DDVDGHPRFR STWLRMAAMI HQSGRPVVLC GTVVPPEFEP
LPERVFFADI HYLALVAEPE VLTRRLRARP AWRGWDEPRI AEMLEFTEWL RREAAGMSPP
VELFDTTEAS LTESVDHVER WVRRGLAAHR ASEAVRVGAD