Gene Svir_02170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02170 
Symbol 
ID8385555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp218917 
End bp219318 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID644974318 
Productpredicted transcriptional regulator 
Protein accessionYP_003132126 
Protein GI257054294 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GTGCAGTTTC GGCGCGGACC GGACTGTCCC TGCGTACCAT CCGCTACTAC 
GAGGAAGTCG GACTGGTGAC TCCCAGCGCC CGCAGCCAAG GCGGCTTCCG GCTCTACACC
GAGCCCGATG TGGCGCGCCT CAACCTCATT CGGCGCATGA AGCCGCTCGG GTTCCAGCTC
GATGAGATGC GGGAGCTGCT AGGCCTGCTG TACCCGGAGC CCCGGGCCGA CGACGAACCC
GCGGTGCTGG AGGAGCACGA GCTGCGCAGA CTACGGGAGT TCACGGAGAA GGCGGAGCGC
CGCTGCCTCG AACTGCGCGC CACACTCGAC ACGGCCGAGG AGTTCGCCGC GCTACTCCGG
GACCGACTCG CCCGGCACAC GGAGCGCGCC CGCAAGACCT GA
 
Protein sequence
MRIGAVSART GLSLRTIRYY EEVGLVTPSA RSQGGFRLYT EPDVARLNLI RRMKPLGFQL 
DEMRELLGLL YPEPRADDEP AVLEEHELRR LREFTEKAER RCLELRATLD TAEEFAALLR
DRLARHTERA RKT