Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01960 |
Symbol | |
ID | 8385534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 201905 |
End bp | 202429 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644974298 |
Product | Protein of unknown function (DUF742) |
Protein accession | YP_003132106 |
Protein GI | 257054274 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.505418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGCGC ACGCGCGGGA CTGGCGGCTC GACCAGCGCT GTGCGAACAC CGCGAGCGGT GTCGTGGGCG AGTTCGTTGC GCACTCCATC GCGACGGCGG GTACCGCCGA CTCAGGTTCG TCCCACGTTG GCGAGCCCGC ACGGTCCGGA CTGATAGCCG TTCGGTTGCT TCTCATGGCA CGGTCGCTGG TCATCCAGGT CTGGGACAAC CACGAATCGG CGCCGACGTC GCTCTCCGAA AGTCCCTTCC AGGCTGACAT CGAGGACTGG GGCTACGACC TACCCCGTCC CGGTCGACGC GTTGTTTGGT GCGTCATCAC CAGGCAGAAC AGGGGCATCG ACGACACGGT GCGATTGTCT CCGGTGCTAC CGCGCCGTGA ACGGAAGAGG TATCCGGAAC CGCGCGTTCT GATCAATCCA CTGCGTGACA TCAGGTTGCT GCAACGCGTT CTCGACGGAC TTCGCTCGCT CGACCGAAGT GCCGAGAAGG AAACGAATAC CGACCACCTC AGAAGGGCGG GATAA
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Protein sequence | MQAHARDWRL DQRCANTASG VVGEFVAHSI ATAGTADSGS SHVGEPARSG LIAVRLLLMA RSLVIQVWDN HESAPTSLSE SPFQADIEDW GYDLPRPGRR VVWCVITRQN RGIDDTVRLS PVLPRRERKR YPEPRVLINP LRDIRLLQRV LDGLRSLDRS AEKETNTDHL RRAG
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