Gene Svir_01960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01960 
Symbol 
ID8385534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp201905 
End bp202429 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID644974298 
ProductProtein of unknown function (DUF742) 
Protein accessionYP_003132106 
Protein GI257054274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.505418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGCGC ACGCGCGGGA CTGGCGGCTC GACCAGCGCT GTGCGAACAC CGCGAGCGGT 
GTCGTGGGCG AGTTCGTTGC GCACTCCATC GCGACGGCGG GTACCGCCGA CTCAGGTTCG
TCCCACGTTG GCGAGCCCGC ACGGTCCGGA CTGATAGCCG TTCGGTTGCT TCTCATGGCA
CGGTCGCTGG TCATCCAGGT CTGGGACAAC CACGAATCGG CGCCGACGTC GCTCTCCGAA
AGTCCCTTCC AGGCTGACAT CGAGGACTGG GGCTACGACC TACCCCGTCC CGGTCGACGC
GTTGTTTGGT GCGTCATCAC CAGGCAGAAC AGGGGCATCG ACGACACGGT GCGATTGTCT
CCGGTGCTAC CGCGCCGTGA ACGGAAGAGG TATCCGGAAC CGCGCGTTCT GATCAATCCA
CTGCGTGACA TCAGGTTGCT GCAACGCGTT CTCGACGGAC TTCGCTCGCT CGACCGAAGT
GCCGAGAAGG AAACGAATAC CGACCACCTC AGAAGGGCGG GATAA
 
Protein sequence
MQAHARDWRL DQRCANTASG VVGEFVAHSI ATAGTADSGS SHVGEPARSG LIAVRLLLMA 
RSLVIQVWDN HESAPTSLSE SPFQADIEDW GYDLPRPGRR VVWCVITRQN RGIDDTVRLS
PVLPRRERKR YPEPRVLINP LRDIRLLQRV LDGLRSLDRS AEKETNTDHL RRAG