Gene Svir_01600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01600 
Symbol 
ID8385498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp171019 
End bp171570 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID644974264 
ProductProtein of unknown function (DUF2587) 
Protein accessionYP_003132075 
Protein GI257054243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.620964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0409014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGC CGAACAACCC GGACACAGGC CGGCCGGACA CCTCGCAGCA CGTCGTGGTG 
GTGGGCCCGG ACGGGTCACC CGTGGGTGCT GCCCGTGTCA ACCCCGAGGA CGAGGAGAAG 
ACCGAATCCG TCGGTGACAT GGTGGAGGAA CCCGCCAAGG TCATGCGGAT CGGCACCATG 
ATCAAGCAGT TGCTGGAGGA GGTCCGGGAA GCCCCGCTGG ACGACGCCAG CCGCAACCGG 
CTCCGGGAGA TTCACGCGAC GTCGATCAAG GAGCTCGAGA AGGCGCTCGC ACCGGAGCTG 
CAGGAAGAGT TGGAACGCCT GGTCGCGCCG TTCACGGCCG ACACCACGCC GTCCGACGCG 
GAACTGCGAG TGGCGCAGGC ACAGCTGGTG GGCTGGTTGG AGGGTCTCTT CCACGGCATC 
CAGACCGCCC TGTTCGCGCA GCAGATGGCC GCGCGGGTGC AGCTGGAACA CATGCGCCGG 
GGACTGCCGC AGGGCGCCAG GCAGAGCACC GAACAGCAGA GCGGCCTCGG CAGCACGGGC 
CAATACCTGT GA
 
Protein sequence
MTEPNNPDTG RPDTSQHVVV VGPDGSPVGA ARVNPEDEEK TESVGDMVEE PAKVMRIGTM 
IKQLLEEVRE APLDDASRNR LREIHATSIK ELEKALAPEL QEELERLVAP FTADTTPSDA 
ELRVAQAQLV GWLEGLFHGI QTALFAQQMA ARVQLEHMRR GLPQGARQST EQQSGLGSTG 
QYL