Gene Svir_01320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01320 
Symbol 
ID8385470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp140264 
End bp140842 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID644974236 
Productmembrane-associated phospholipid phosphatase 
Protein accessionYP_003132047 
Protein GI257054215 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.561949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.787297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC GACGTTCCGG TGCCGAGCGG GTGAGTGACG AGGAGCGGGT CCTCGACCAC 
TCGCCCGCCT CCGGCGAGGT GGCTCTCCTC ATCGGCGTGC AGCGCGCCCT CGCGCGGCCC
GTCGTCGTCA AGGCCGCCCG TGGGCTCTCT CACTTCGGGG AGCACAGTGC GGGCTGGTTC
GCGTTGGGAC TGGTGGGGGC AGCGTTCGAT TCGGCACGGC GCAAGGAGTG GCTCACCGCC
GCGATGGGTG CCGTCGGCGC GCACGCGGCC TCGATCGCGG TGAAACGTGT CGTGCGGAGG
CGGCGACCGG AGCACCCCGA CATCACGATC GGTGTCGGAA CTCCCAGCCG ATTGAGTTTC
CCTTCGTCAC ACGCCACGTC GACAACGGCC GCCGCTGTGC TGTACTCGGG GCTGATCGGG
CGTAACCTCG TGCCTGCCCT CGTGCCGCCG ATGCTGGTCT CTCGCCTCGT GCTCGGCGTG
CACTACCCGA CCGACGTGCT CGCCGGCGCC GCCCTCGGTG GTGCCGTCGG CGGCATCCTG
CGCCGCAGGC TGACCTCACG GAAGCGGACA CGACGATGA
 
Protein sequence
MLERRSGAER VSDEERVLDH SPASGEVALL IGVQRALARP VVVKAARGLS HFGEHSAGWF 
ALGLVGAAFD SARRKEWLTA AMGAVGAHAA SIAVKRVVRR RRPEHPDITI GVGTPSRLSF
PSSHATSTTA AAVLYSGLIG RNLVPALVPP MLVSRLVLGV HYPTDVLAGA ALGGAVGGIL
RRRLTSRKRT RR