Gene Svir_01240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01240 
Symbol 
ID8385462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp130870 
End bp132036 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID644974228 
Productglutathionylspermidine synthase 
Protein accessionYP_003132039 
Protein GI257054207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.636699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAGGG AGACGGGGAC GCCCCGCGCC GACTGGGAGA GGATCGTCGC CGAACAGGGG 
TTGGTGTTCG GCACCCCCGC GCGGTATGCG TCGGGGGAGC CTCGGCCGTA CTGGGACGAG
TCGGTGCACT ACGTGCTTCA GATGGACGAG GTGCTGTCGG TGGAGGCCGA CGTCGAACTG
TTGCACTCGA TGTGTCTTGA GGCCGTCGAC CACGTGGTGA CCACCGAACG GTATGCCGAG
TTCGGCCTGC CCGAATGGGT GTGGCCGCAC ATCGCGGAGT CGTGGCGGCG TGGGGATCCG
CACCTCTACG GCCGGTTCGA CCTGCGTTAC GACGGCAGGC GCCCCGCCAA ACTGCTGGAG
TACAACGCCG ACACGCCCAC CTCACTGCTC GAGGCGGCCA TCCTGCAGTG GTATTGGAAG
ACCGACGTGC ACCCCGACGA CGACCAGTGG AACTCACTGC ACGAACAGCT CGTCGACCGG
TGGCGGGAGA TCGGTAAGAA GCTCCCCTCG AACGAGGTCT ACTTCACCTG GTCGACCGCC
GACTCCACCG GTGAGGACCA CCTCACGGTC ACGTACCTCC AGGAGACGGC GGCGGAAGCC
GGACTCGACA CGGTGGCCCT GGCCATCGAG GAGATCGGCT GGGACCCGTT GCTCAAGCGC
TTCGTCGACC TCGAGGAGGC GCCCATGGGT ACCGTCATGA AGTTGTACCC GTGGGAGTGG
ATGATCGACG AGGAGTTCGG GCGTTACGCC CTCGAATCGC TGCCGCAGAC GCTGTGGATC
GAGCCGTTGT GGAAGATGCT GCTGTCCAAC AAGGCGATCC TCGGCATCCT GTGGGAGAAC
TATCCCGGGC ATCCCAACCT GTTGCCCGCG TTCAACGACC AACCGGGGCT GCTCACCGAA
TACGTGCGCA AGCCCAAGCT GGGCCGGGAA GGCGCGAACG TGCGGATCGT CGCGCCCGGT
TACGAGACCG AGACCGGCGG CGTCTACGGC GCCGAGGGCT ATGTCTACCA GGCGTTCGAC
CCGTTGCCGG AGTTCGACGG CAACCGGCCG GTGTTGGGTG CGTGGATCGT GGGGGACAAC
GCGGCCGGGC TCGGCATCCG GGAGTCGTCG GGGCTCGTCA CCGATGACGG TGCCGCGTTT
GTCCCACACC GCATCCCGGA GTCGTGA
 
Protein sequence
MHRETGTPRA DWERIVAEQG LVFGTPARYA SGEPRPYWDE SVHYVLQMDE VLSVEADVEL 
LHSMCLEAVD HVVTTERYAE FGLPEWVWPH IAESWRRGDP HLYGRFDLRY DGRRPAKLLE
YNADTPTSLL EAAILQWYWK TDVHPDDDQW NSLHEQLVDR WREIGKKLPS NEVYFTWSTA
DSTGEDHLTV TYLQETAAEA GLDTVALAIE EIGWDPLLKR FVDLEEAPMG TVMKLYPWEW
MIDEEFGRYA LESLPQTLWI EPLWKMLLSN KAILGILWEN YPGHPNLLPA FNDQPGLLTE
YVRKPKLGRE GANVRIVAPG YETETGGVYG AEGYVYQAFD PLPEFDGNRP VLGAWIVGDN
AAGLGIRESS GLVTDDGAAF VPHRIPES