| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00950 |
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| Symbol | |
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| ID | 8385433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 96185 |
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| End bp | 96778 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974199 |
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| Product | RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family |
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| Protein accession | YP_003132010 |
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| Protein GI | 257054178 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGT TCGTACCCAC CGTATGCACA GCCCCCCACG ACGACGCCTG GGCGGGCGCC
ACCGGCCACA GGAAGGAAGC GGTCGTGCCT GGCGACCTCA CGGACTTCGC CGAGTTCGTG
CAGAGCAGCC TGCCCGGATT GCTGCGGTAC GGGCATGCTT TGACGGGCAA CCCGCACGAC
GCCGCGGACC TCGTGCAGTC GGTGCTGGAG AAGGTCGGAT CGCGCTGGGC CTCGATCCAA
CGCAAGACGG CCGATCCACT CCCGTACGTG CGCCGTTCGA TGGCCAACGC GCACATCAGC
CGGTGGCGTC GGTTTCGGCG GGAGAACCTG GTCGCCGACA TCCCCGAGCC CGGCTCCGTG
GAACCCACCG ATCCTTTCGA GCACGAACCG CTGTGGCAGG CGCTACGCGA ACTGCCTCCG
AAACAGCGGG CCGTCATCGT GCTCCGGTAT TACGAGGGGC TGAGTGAGGC GGAGATCGCC
GCTTCGTTGG GCATCAGCCC CGGGACCGTC AAAAGCCAGG CCAGTAAGGC ACTCACCTCA
CTGCGAGGCA AGCTACGCCG CGATGCGAGC AGCGAAGGGA GGGAGACGGT ATGA
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| Protein sequence | MTAFVPTVCT APHDDAWAGA TGHRKEAVVP GDLTDFAEFV QSSLPGLLRY GHALTGNPHD
AADLVQSVLE KVGSRWASIQ RKTADPLPYV RRSMANAHIS RWRRFRRENL VADIPEPGSV
EPTDPFEHEP LWQALRELPP KQRAVIVLRY YEGLSEAEIA ASLGISPGTV KSQASKALTS
LRGKLRRDAS SEGRETV
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