Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00500 |
Symbol | |
ID | 8385388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 49016 |
End bp | 49678 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974154 |
Product | NAD dependent epimerase/dehydratase family protein |
Protein accession | YP_003131966 |
Protein GI | 257054134 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.39496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.546332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTCG TCATCGCCGG AGGACACGGC AAGATCGCGT TGCGGTTGGA GCGGCTTCTC GTCTCCAACG GTGACACGGC CGTGGGCATC ATCCGCAAGC CGGAACAGGC CGAGAAGCTG CGGGAAATCG GTGCCGAACC CGTCGTGCTC GATCTGGAAC AGGCGAGCGT CGACGAGGTC GCCGACGTGT TGTCCGGAGC CGACGCGGCC GTTTTCTCGG CGGGCGCGGG GCCCGGCAGC GGCGTGGCAC GTAAGGACAC CGTCGACAGG GCGGCGGCCG TGTTGTTCGC CGAAGCCGCC GAGCGCGCGG GCGTGCGGCG ATTCGTGCAG GTCAGCGCGA TGGGTGCGGG TGATCCGATC GACGCGGACG TCGAGGCGCG GGTCGGTGAG GTGTTCGCCG CGTATCTTCG TGCGAAAGCC GCCGCGGAAG AGGATCTGCG CGGTCGTGAT CTGGATTGGA CCATCCTGCG GCCGGGTCGG CTCACCGATG AACCCGGGAC GGGGCTGGTG CGCCTGGCCG ACGACGTGCC GCGCGCCGAT GTGCCGCGGG ACGACGTGGC GGAGGTGTTG CGGCGGTTGG TGGCCGACAC CACCACGTAC GGGCGAACCC TGGAATTGGT GTCCGGGGAC ACGCCGATCG CGGAGGCCAT CGAGCGTCTT TAG
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Protein sequence | MRVVIAGGHG KIALRLERLL VSNGDTAVGI IRKPEQAEKL REIGAEPVVL DLEQASVDEV ADVLSGADAA VFSAGAGPGS GVARKDTVDR AAAVLFAEAA ERAGVRRFVQ VSAMGAGDPI DADVEARVGE VFAAYLRAKA AAEEDLRGRD LDWTILRPGR LTDEPGTGLV RLADDVPRAD VPRDDVAEVL RRLVADTTTY GRTLELVSGD TPIAEAIERL
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