Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1890 |
Symbol | |
ID | 3762627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 1970163 |
End bp | 1971821 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | 2-isopropylmalate synthase |
Protein accession | YP_394399 |
Protein GI | 78778084 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.4995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TTCCACAAGG GAAATATCGT CCCTATCCAA AGATAGATTT GCCAGACAGA ACTTGGCCAA ACAACAGCAT AACAGAAGCT CCAAAATGGT GTAGTGTAGA TTTGCGTGAT GGTAATCAAG CACTTATCAA CCCAATGGAC ATGAATAAAA AACTTTCACT ATTTGCACTC TTACTCAAAA TTGGATTTAA GGAGATTGAA GTTGGTTTTC CATCTGCTTC AAAAGTTGAA TTTGACTTTT TACGCCGCCT AGTAGATGAC AAACTTATCC CTGATGACGT AACTATTCAA GTATTAGTTC AAGCTAGAGA GCATTTGATA GAGAGAACTT TTGAAGCACT TCGTGGTGTT AAAAAAGCGA CTATTCATCT ATACAACTCA ACTTCGAGTG CTCAAAGAAA AATGGTATTT CAAAAATCTA AAGATGAGAT AATTACTCTT GCGCTAGAGG GTGTTGACCT TGTTAAAAAA TATGAAAAAT CTCATGATGG AGAGATATTT TTAGAGTACT CTCCTGAGAG TTTTACGGGA ACTGAATTAG AGTATGCCGC AAAGATAGCA AATGCGGTAA CAAAAAGATG GGGGATTAGT GATAGCAGAA AAGTTATCAT AAATCTTCCA GCAACAGTAG AGATGGCAAC ACCAAATATC TACGCAGATC AGATTGAGTG GATGAGCAGA CATTTGGACA ATAGAGAAAA TGTAATCATT TCAACTCACA CTCACAACGA CAGAGGGACA AGTATAGCAG CTACCGAGTT AGCACTTTTA GCAGGTGCAG ACAGAGTTGA GGGAACACTT TTGAGCAATG GAGAGAGAAC AGGAAATGTT GATATTATAA CTCTTGCTCT TAATATGACA ACTCAAGGTA TTGATTCTAA ACTTGATTTT TCTAACGTAA ATGAGGTTTT AGATGTAGTT GAGAGATGCA CGGAGATAGA GACTCATGTT CGTCATCCAT ACGTTGGAGA GCTTGTATAT ACGGCATTTT CTGGCTCTCA TCAAGATGCG ATCAATAAAG GTTTAGCTCA TAGAAAATCA AATCCAGCTT CACATTGGGA AGTTCCATAT CTTCCTATTG ACCCAGATGA TGTGGGGCGA AGCTATGAGA GCATCATCCG TATCAATTCA CAATCTGGAA AAGGCGGAGT TGCTTATATA TTAGAGAAAA ATTTTGGATA CCAACTTCCA AAAACGATGC ATCCAGAGAT GGGAAAATTA GTTCAAGATG TAAGTGATAA AAAAGGTCAA GAGTTAAGCT CTGAGGAGAT ATTTGAGATA TTTAACGAGA ACTACTTTAA CATAAAAGAG CATATCTCTT TGGTTGATTT TACAGTCTCA TCGCTAAAAG GTATCTCAAA ATGTACACTT ACCTATATCC TTAATGGCAC TGAGATAGTC TCAAACGGAG AGGGTAACGG TCCAGTGGAT GCTTGTAGAG ACGCTTTAAT GAAAGATTAT AGAAACAGTT TTTCTATAAA CTCATACTTT GAACACTCAT TTGGCAACAA AAGTTCTGCA AAAGCGATAG CATATATAGA GATAGAGACC CCTAAGACTC TATCTTGTTT TGGTGTTGGA GCTGACAATG ATATAGCAAC AGCTTCAGTA AAAGCTCTAT TTTGCGCACT AAACAGAGCT TTTATCTAA
|
Protein sequence | MKNIPQGKYR PYPKIDLPDR TWPNNSITEA PKWCSVDLRD GNQALINPMD MNKKLSLFAL LLKIGFKEIE VGFPSASKVE FDFLRRLVDD KLIPDDVTIQ VLVQAREHLI ERTFEALRGV KKATIHLYNS TSSAQRKMVF QKSKDEIITL ALEGVDLVKK YEKSHDGEIF LEYSPESFTG TELEYAAKIA NAVTKRWGIS DSRKVIINLP ATVEMATPNI YADQIEWMSR HLDNRENVII STHTHNDRGT SIAATELALL AGADRVEGTL LSNGERTGNV DIITLALNMT TQGIDSKLDF SNVNEVLDVV ERCTEIETHV RHPYVGELVY TAFSGSHQDA INKGLAHRKS NPASHWEVPY LPIDPDDVGR SYESIIRINS QSGKGGVAYI LEKNFGYQLP KTMHPEMGKL VQDVSDKKGQ ELSSEEIFEI FNENYFNIKE HISLVDFTVS SLKGISKCTL TYILNGTEIV SNGEGNGPVD ACRDALMKDY RNSFSINSYF EHSFGNKSSA KAIAYIEIET PKTLSCFGVG ADNDIATASV KALFCALNRA FI
|
| |