Gene Suden_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1890 
Symbol 
ID3762627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1970163 
End bp1971821 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content37% 
IMG OID 
Product2-isopropylmalate synthase 
Protein accessionYP_394399 
Protein GI78778084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.4995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTCCACAAGG GAAATATCGT CCCTATCCAA AGATAGATTT GCCAGACAGA 
ACTTGGCCAA ACAACAGCAT AACAGAAGCT CCAAAATGGT GTAGTGTAGA TTTGCGTGAT
GGTAATCAAG CACTTATCAA CCCAATGGAC ATGAATAAAA AACTTTCACT ATTTGCACTC
TTACTCAAAA TTGGATTTAA GGAGATTGAA GTTGGTTTTC CATCTGCTTC AAAAGTTGAA
TTTGACTTTT TACGCCGCCT AGTAGATGAC AAACTTATCC CTGATGACGT AACTATTCAA
GTATTAGTTC AAGCTAGAGA GCATTTGATA GAGAGAACTT TTGAAGCACT TCGTGGTGTT
AAAAAAGCGA CTATTCATCT ATACAACTCA ACTTCGAGTG CTCAAAGAAA AATGGTATTT
CAAAAATCTA AAGATGAGAT AATTACTCTT GCGCTAGAGG GTGTTGACCT TGTTAAAAAA
TATGAAAAAT CTCATGATGG AGAGATATTT TTAGAGTACT CTCCTGAGAG TTTTACGGGA
ACTGAATTAG AGTATGCCGC AAAGATAGCA AATGCGGTAA CAAAAAGATG GGGGATTAGT
GATAGCAGAA AAGTTATCAT AAATCTTCCA GCAACAGTAG AGATGGCAAC ACCAAATATC
TACGCAGATC AGATTGAGTG GATGAGCAGA CATTTGGACA ATAGAGAAAA TGTAATCATT
TCAACTCACA CTCACAACGA CAGAGGGACA AGTATAGCAG CTACCGAGTT AGCACTTTTA
GCAGGTGCAG ACAGAGTTGA GGGAACACTT TTGAGCAATG GAGAGAGAAC AGGAAATGTT
GATATTATAA CTCTTGCTCT TAATATGACA ACTCAAGGTA TTGATTCTAA ACTTGATTTT
TCTAACGTAA ATGAGGTTTT AGATGTAGTT GAGAGATGCA CGGAGATAGA GACTCATGTT
CGTCATCCAT ACGTTGGAGA GCTTGTATAT ACGGCATTTT CTGGCTCTCA TCAAGATGCG
ATCAATAAAG GTTTAGCTCA TAGAAAATCA AATCCAGCTT CACATTGGGA AGTTCCATAT
CTTCCTATTG ACCCAGATGA TGTGGGGCGA AGCTATGAGA GCATCATCCG TATCAATTCA
CAATCTGGAA AAGGCGGAGT TGCTTATATA TTAGAGAAAA ATTTTGGATA CCAACTTCCA
AAAACGATGC ATCCAGAGAT GGGAAAATTA GTTCAAGATG TAAGTGATAA AAAAGGTCAA
GAGTTAAGCT CTGAGGAGAT ATTTGAGATA TTTAACGAGA ACTACTTTAA CATAAAAGAG
CATATCTCTT TGGTTGATTT TACAGTCTCA TCGCTAAAAG GTATCTCAAA ATGTACACTT
ACCTATATCC TTAATGGCAC TGAGATAGTC TCAAACGGAG AGGGTAACGG TCCAGTGGAT
GCTTGTAGAG ACGCTTTAAT GAAAGATTAT AGAAACAGTT TTTCTATAAA CTCATACTTT
GAACACTCAT TTGGCAACAA AAGTTCTGCA AAAGCGATAG CATATATAGA GATAGAGACC
CCTAAGACTC TATCTTGTTT TGGTGTTGGA GCTGACAATG ATATAGCAAC AGCTTCAGTA
AAAGCTCTAT TTTGCGCACT AAACAGAGCT TTTATCTAA
 
Protein sequence
MKNIPQGKYR PYPKIDLPDR TWPNNSITEA PKWCSVDLRD GNQALINPMD MNKKLSLFAL 
LLKIGFKEIE VGFPSASKVE FDFLRRLVDD KLIPDDVTIQ VLVQAREHLI ERTFEALRGV
KKATIHLYNS TSSAQRKMVF QKSKDEIITL ALEGVDLVKK YEKSHDGEIF LEYSPESFTG
TELEYAAKIA NAVTKRWGIS DSRKVIINLP ATVEMATPNI YADQIEWMSR HLDNRENVII
STHTHNDRGT SIAATELALL AGADRVEGTL LSNGERTGNV DIITLALNMT TQGIDSKLDF
SNVNEVLDVV ERCTEIETHV RHPYVGELVY TAFSGSHQDA INKGLAHRKS NPASHWEVPY
LPIDPDDVGR SYESIIRINS QSGKGGVAYI LEKNFGYQLP KTMHPEMGKL VQDVSDKKGQ
ELSSEEIFEI FNENYFNIKE HISLVDFTVS SLKGISKCTL TYILNGTEIV SNGEGNGPVD
ACRDALMKDY RNSFSINSYF EHSFGNKSSA KAIAYIEIET PKTLSCFGVG ADNDIATASV
KALFCALNRA FI