Gene Suden_1549 details

Gene Information

• Locus tag: Suden_1549
• ID: 3763271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 1620112
• End bp: 1622082
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 37%
• Product: TonB-dependent receptor
• Protein accession: YP_394061
• Protein GI: 78777746

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.751142
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GTGTAATTGG TATATCTATA GCGACATCTA TGCTCCTAGC GGAGAGTTTT 
ACGCTTGGGC AAGTGAGTGT GTTTGAAAAT ATTAAAGATA TAAATCTATT TGAGCAGAGT 
ATCTCATCTG AAGTGATTTC ACAAAACAGC TCAGATACGG TCTCAGAAGC ACTAGATAAT 
ATTAGCGGTG TAACCCAAGA TACTCAAGGT GCTCGCACTG AATCAACACT GCACATAAGA 
GGTTTTGATG CAAAAAGAGT TGGAGTTTTT ATAGATGGTA TTCCTGTTTA TGTTCCTTAT 
GATGGAAACT TTGATTATGC ACGATTTTTA ACAACAGACA TTGCCTCTAT TGATGTATCA 
AAAGGGTACT CCTCTGTAGT TTATGGAGGA GCAAATATGG GAGGTGTTGT AAATATCGTC 
TCAAAAAAGC CTACAAAAGA GTTTGAGGGG AGTGTTAAAG GCAAGATTGT CTTAGATTCA 
GATGGCAAAA TGGCAAGACA TGTAGAGAGC CTAAACGCTG GTTCAAGACA AAATAACTTT 
TACGTGCAGC TAGGTGCTAG CTATAGCAAA CAAGACCATT TTAGGCTTAG TGATGATTAT 
GAAGCATCCC CAACGCAACC AGAAGGAGAC AGACTTCGCT CTGAGGCAGA GGATAAAAAA 
GTAAGCTTAA AAGCTGGATA TGTAGCAGAT GATGGTAGCG AGATCGCTAT CTCTTATGCT 
AATCAACAAG GAGAAAAACA GCAGCCACCA GTGACAGATA CGACTTTTGC AAAAAACAAA 
GATTGGGATT GGCCATATTG GGATAAAGAG ACTATCTCCA TTACAGGGCA AAAAAACTTC 
AATTCAAGTT ATGTAAAAGC CTTGGCATAT TTTGATAAAA GCAAAAATTC AATTTACTCT 
TACGATAACG CTACTTTTAG CGCTATAACA AAAAACTGGG CGTTTAAAAG CCGATATGAT 
GATTATAGTT ACGGAGCCCG TTTAGAATAT GGGGTTGAAC TTGGAGATAA CTTCCTAAAA 
GCAGCAGCAA GCTACAAAAA AGATGTACAC CGCGCTTACG ATAAAAACAA AACAACAGAT 
GTTGAATCTT TAGTTGAGAG ATATGAAGAC AACACCATCT CTCTTGGCTT GGAGGATGTT 
TACTCAATCA CATCAAAGCT TGAATTTCTA GCGGGTGTGA GTTATGACAG AAAAGAAGCA 
GATGAGATTT ATGACACAAA CACCGCTTAT CTGAATATGT TAGCTCTTGA AGTAGAGGAC 
TCTTTTGCAC CTCAAGCTGC TCTAATCTAC TCACTTGATG AGAGTTCAAA AGTAAAGGTG 
AGCATCTCAA GAAAAACATA TATGCCAACC ATGAAAGATA GATACTCAAG AAAATTCAAC 
TCTTATGTGC CAAATGTAGA GCTTAAAAAT GAGGCAGCTA CAAACTATGA GCTTAGTTAT 
CTAAAAAAAT ATGACGCGCT AACATCAAGA GTAAATCTAT TTTTTACAAG AGTTGAAGAT 
GCAATTCAAA GTGTAGTTTT TGCTTCAAAT CCTGCATACA ATCAAAACAA AAATGTAGGA 
ACATTCGAGC ACAGAGGCGT TGAACTGGAG CTAAATTACA AAACTGATAC TCTTGAAGTT 
GGAGGGAACT ACACATATAT AAGTGTTAAA AGCAGAGGCG ACAACGGTGT AGAAATCATA 
GATGTACCAA AACATCAACT CTTTACTTTT GCACAAATAG AGGTGGCAAA ATATGTATCG 
CTGTATGCCA ACATGAAGTT TAGAGATGGC GCTTACGAAA ACAAACTAAA TGGCACTTAT 
GTAACAAATC CAAATTTTAC AACATTTGAT TTAAAAGTGA TTTATGAGCC AACAAAAGCC 
ATCACAGCAG AGATTGGTGT AAAAAATTTG ACAGACGAAC TTGTAAGATA TGACATGGCA 
TATCCAATGG CAGGGCGAGA ATATTTTGCT ACAATGAACT ATAAATTTTA A 

 

Protein sequence

MKKSVIGISI ATSMLLAESF TLGQVSVFEN IKDINLFEQS ISSEVISQNS SDTVSEALDN 
ISGVTQDTQG ARTESTLHIR GFDAKRVGVF IDGIPVYVPY DGNFDYARFL TTDIASIDVS 
KGYSSVVYGG ANMGGVVNIV SKKPTKEFEG SVKGKIVLDS DGKMARHVES LNAGSRQNNF 
YVQLGASYSK QDHFRLSDDY EASPTQPEGD RLRSEAEDKK VSLKAGYVAD DGSEIAISYA 
NQQGEKQQPP VTDTTFAKNK DWDWPYWDKE TISITGQKNF NSSYVKALAY FDKSKNSIYS 
YDNATFSAIT KNWAFKSRYD DYSYGARLEY GVELGDNFLK AAASYKKDVH RAYDKNKTTD 
VESLVERYED NTISLGLEDV YSITSKLEFL AGVSYDRKEA DEIYDTNTAY LNMLALEVED 
SFAPQAALIY SLDESSKVKV SISRKTYMPT MKDRYSRKFN SYVPNVELKN EAATNYELSY 
LKKYDALTSR VNLFFTRVED AIQSVVFASN PAYNQNKNVG TFEHRGVELE LNYKTDTLEV 
GGNYTYISVK SRGDNGVEII DVPKHQLFTF AQIEVAKYVS LYANMKFRDG AYENKLNGTY 
VTNPNFTTFD LKVIYEPTKA ITAEIGVKNL TDELVRYDMA YPMAGREYFA TMNYKF