| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_1464 |
|---|
| Symbol | clpX |
|---|
| ID | 3763362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 1534946 |
|---|
| End bp | 1536190 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_393976 |
|---|
| Protein GI | 78777661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.624991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAA GAACATGTAG CTTTTGTAAT GCACTAGAGA GTGATGAAAA CCCACTAATC
GCAGGGAGTG GTGTCTATAT ATGTAAAAAT TGTGTTGTTT CTGCATATAA AATTATGTTT
GGTGATGACA AATTTTTAAA CTCATCTAAA GATGCTAATT TAACTGATGA AAACAGCACT
CTTATGACTC CAAAAGAGCT AAATTTGTTT TTGGCTGATT ATATTATTGG GCAAGAGAGA
GCTAGAAAAC TTCTAAGCGT AGCTGTATAT AACCACTATA AAAGAATTTT CAAAACACAT
ACAACAAAAG ATGATGATAC TGAAATAGCA AAATCAAACG TACTTCTTAT AGGACCAACT
GGAAGCGGAA AAACACTTAT GGCTCAAACA ATTGCTAGAG TTTTAAATGT TCCTATTGCT
ATTGCTGATG CTACAAGTTT AACAGAAGCT GGATATGTTG GAGAAGATGT TGAGAACATT
TTAACAAAAC TTCTTCAAGC AGCAGACGGA GACGTTGAGA GAGCACAAAG AGGAATAGTC
TTCATAGATG AGATTGATAA AATTTCTCGT ATGAGTGAAA ACCGCTCTAT TACCCGTGAT
GTATCTGGGG AGGGTGTTCA ACAAGCTCTT TTAAAAATCA TAGAGGGTGC TGTTGTAAAT
ATTCCACCAA AAGGTGGAAG AAAACATCCA AATCAAGAGT TTATTGCGAT TGACACAACA
GGAATTTTGT TTATCTGTGG TGGTGCGTTT GATGGTCTTG ATGAGATTTT AAAGAAAAAA
CAGGGTGAAA ATGTTTTAGG TTTTGGTCAT GAAAAGAAGA GCAAAAAAGA GCAAAAAATG
AGTTATGATG CAGTTGAGCC TGATGATTTA GTAAATTATG GTCTTATTCC TGAGCTTGTT
GGGCGTCTTC CAATTATTGC ATCATTAAAT GAGATTACAG AAGATGATAT GGTTCGCATA
CTTACTGAAC CTAAAAATTC AATTATCAAG CAATATAAAA AACTCTTCTC TATAGACAAT
GTTGAACTAA ATTTTGAAGA AGATGCTCTA AGAGCAATTG CTACAAAATC TATAAAAAGA
AAAACTGGTG CTCGTGGACT TCGTGCAATT TTAGAAGAGA ATATGATAGA TATTATGTAT
GAACTCCCAG AGTATGGTGG CTATGAAGTT TTAGTAACAA AAGCCGTCAT AGACAACGCT
GAGGCTCCTG TCTATATCAA AAAGAACTCA AAACAAATTG CATAA
|
|---|
| Protein sequence | MIIRTCSFCN ALESDENPLI AGSGVYICKN CVVSAYKIMF GDDKFLNSSK DANLTDENST
LMTPKELNLF LADYIIGQER ARKLLSVAVY NHYKRIFKTH TTKDDDTEIA KSNVLLIGPT
GSGKTLMAQT IARVLNVPIA IADATSLTEA GYVGEDVENI LTKLLQAADG DVERAQRGIV
FIDEIDKISR MSENRSITRD VSGEGVQQAL LKIIEGAVVN IPPKGGRKHP NQEFIAIDTT
GILFICGGAF DGLDEILKKK QGENVLGFGH EKKSKKEQKM SYDAVEPDDL VNYGLIPELV
GRLPIIASLN EITEDDMVRI LTEPKNSIIK QYKKLFSIDN VELNFEEDAL RAIATKSIKR
KTGARGLRAI LEENMIDIMY ELPEYGGYEV LVTKAVIDNA EAPVYIKKNS KQIA
|
|---|
| |