Gene Suden_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1377 
SymbolhslU 
ID3763429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1446442 
End bp1447770 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content35% 
IMG OID 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_393889 
Protein GI78777574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00581001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAA CGCCAAAAGA GATTGTTGAG TATCTAGATG AGTATGTAAT ATCTCAGCAA 
AATGCCAAAA AAACTATCGC TCTTGCTCTT AGAACTAGAT ATAGAAGAAT GCAGCTAAGC
CCTGAGCTTC AAAGCGATAT AACACCAAAA AATATCCTTA TGATAGGCTC AACTGGAGTT
GGTAAAACAG AGATTTCAAG ACGTTTGGCA AAGATGATGA AAGTTCCTTT TATCAAAGTT
GAAGCTAGTA AATATACAGA AGTTGGCTTT GTTGGACGTG ATGTTGAGTC TATGATTAGA
GATTTGGTTG TTGCCTCTAT TGCTATTGTT AAAGCAGAAA AAGAGGAAGA AAATAGAGAA
AAAATTGACA ACTATATTTT AAATAAAATA GTTGAGAAAC TTCTTCCACC TCTTCCACTT
GGTGCTAGTG AGAGTAAAAA AGATGACTAT CAAAGGCTTC TGAGTGTTAT GGAAGAGAGA
GTTTTATCTG GAGAGATGGA TGATAAAATC ATACAACTTG AAGTTCAAAA GATACATGTA
GAATTCAATG ATACAAATCT TCCTCCAGAG ATGGCAAAAG TACAAGAGTC ATTTTCTCGT
GTATTTTCTC AAATGAACAA AGAGGACAAC AAAAAAGAGC TAAGCGTAAA AGATGCCAAA
ATCATCTTAA GAGATGAAGC GAGCGCAAAA CTCATAGACT CAACTCATAT AAATGTTGAA
GCCCTAAGAC GTGCTGAAAA TGGTGGAATT ATTTTTCTTG ATGAGATAGA TAAAATAGCT
ATAAGCGAAA AGTCTCAAGG TAGAAATGAT CCAAGTAAAG AGGGAGTTCA AAGAGATTTG
TTGCCTATCG TTGAGGGAAG TAGCGTTTCT ACAAAATATG GAACAATAAA TACAGACCAT
ATTCTATTTA TCGCAGCTGG TGCTTTTCAT CTATGCAAAC CAAGCGATTT GATTCCAGAA
CTTCAAGGAA GATTTCCTCT TAGAGTTGAG CTTGAATCTT TAAATGAAGA GACTCTGTAC
AAGATATTAA CTCAAACAAA GAACTCTCTT CTAAGACAGT ATGAAGCTCT TCTTAGCGTT
GAGGGAATGA AGCTGACATT TGAAGATGAA GCTATAAAAG CCATCGCTAA ATTAGCACAT
CGTGCAAATG AGATAGCCGA GGATATAGGA GCTAGAAGAC TTCATACCGT TATAGAGAAA
ATCTTAGAAG ATGTTAGCTT CAGTGCAAAC GAGTATAAAG ATAAAGAGTT TATAGTTACT
TCAAAATTAG TACATGAAAA GTTAGACACA ATAGTTGAGA ATGACGATCT CTCTAGATAT
ATCTTATAG
 
Protein sequence
MNLTPKEIVE YLDEYVISQQ NAKKTIALAL RTRYRRMQLS PELQSDITPK NILMIGSTGV 
GKTEISRRLA KMMKVPFIKV EASKYTEVGF VGRDVESMIR DLVVASIAIV KAEKEEENRE
KIDNYILNKI VEKLLPPLPL GASESKKDDY QRLLSVMEER VLSGEMDDKI IQLEVQKIHV
EFNDTNLPPE MAKVQESFSR VFSQMNKEDN KKELSVKDAK IILRDEASAK LIDSTHINVE
ALRRAENGGI IFLDEIDKIA ISEKSQGRND PSKEGVQRDL LPIVEGSSVS TKYGTINTDH
ILFIAAGAFH LCKPSDLIPE LQGRFPLRVE LESLNEETLY KILTQTKNSL LRQYEALLSV
EGMKLTFEDE AIKAIAKLAH RANEIAEDIG ARRLHTVIEK ILEDVSFSAN EYKDKEFIVT
SKLVHEKLDT IVENDDLSRY IL