Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1377 |
Symbol | hslU |
ID | 3763429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 1446442 |
End bp | 1447770 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_393889 |
Protein GI | 78777574 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00581001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTTAA CGCCAAAAGA GATTGTTGAG TATCTAGATG AGTATGTAAT ATCTCAGCAA AATGCCAAAA AAACTATCGC TCTTGCTCTT AGAACTAGAT ATAGAAGAAT GCAGCTAAGC CCTGAGCTTC AAAGCGATAT AACACCAAAA AATATCCTTA TGATAGGCTC AACTGGAGTT GGTAAAACAG AGATTTCAAG ACGTTTGGCA AAGATGATGA AAGTTCCTTT TATCAAAGTT GAAGCTAGTA AATATACAGA AGTTGGCTTT GTTGGACGTG ATGTTGAGTC TATGATTAGA GATTTGGTTG TTGCCTCTAT TGCTATTGTT AAAGCAGAAA AAGAGGAAGA AAATAGAGAA AAAATTGACA ACTATATTTT AAATAAAATA GTTGAGAAAC TTCTTCCACC TCTTCCACTT GGTGCTAGTG AGAGTAAAAA AGATGACTAT CAAAGGCTTC TGAGTGTTAT GGAAGAGAGA GTTTTATCTG GAGAGATGGA TGATAAAATC ATACAACTTG AAGTTCAAAA GATACATGTA GAATTCAATG ATACAAATCT TCCTCCAGAG ATGGCAAAAG TACAAGAGTC ATTTTCTCGT GTATTTTCTC AAATGAACAA AGAGGACAAC AAAAAAGAGC TAAGCGTAAA AGATGCCAAA ATCATCTTAA GAGATGAAGC GAGCGCAAAA CTCATAGACT CAACTCATAT AAATGTTGAA GCCCTAAGAC GTGCTGAAAA TGGTGGAATT ATTTTTCTTG ATGAGATAGA TAAAATAGCT ATAAGCGAAA AGTCTCAAGG TAGAAATGAT CCAAGTAAAG AGGGAGTTCA AAGAGATTTG TTGCCTATCG TTGAGGGAAG TAGCGTTTCT ACAAAATATG GAACAATAAA TACAGACCAT ATTCTATTTA TCGCAGCTGG TGCTTTTCAT CTATGCAAAC CAAGCGATTT GATTCCAGAA CTTCAAGGAA GATTTCCTCT TAGAGTTGAG CTTGAATCTT TAAATGAAGA GACTCTGTAC AAGATATTAA CTCAAACAAA GAACTCTCTT CTAAGACAGT ATGAAGCTCT TCTTAGCGTT GAGGGAATGA AGCTGACATT TGAAGATGAA GCTATAAAAG CCATCGCTAA ATTAGCACAT CGTGCAAATG AGATAGCCGA GGATATAGGA GCTAGAAGAC TTCATACCGT TATAGAGAAA ATCTTAGAAG ATGTTAGCTT CAGTGCAAAC GAGTATAAAG ATAAAGAGTT TATAGTTACT TCAAAATTAG TACATGAAAA GTTAGACACA ATAGTTGAGA ATGACGATCT CTCTAGATAT ATCTTATAG
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Protein sequence | MNLTPKEIVE YLDEYVISQQ NAKKTIALAL RTRYRRMQLS PELQSDITPK NILMIGSTGV GKTEISRRLA KMMKVPFIKV EASKYTEVGF VGRDVESMIR DLVVASIAIV KAEKEEENRE KIDNYILNKI VEKLLPPLPL GASESKKDDY QRLLSVMEER VLSGEMDDKI IQLEVQKIHV EFNDTNLPPE MAKVQESFSR VFSQMNKEDN KKELSVKDAK IILRDEASAK LIDSTHINVE ALRRAENGGI IFLDEIDKIA ISEKSQGRND PSKEGVQRDL LPIVEGSSVS TKYGTINTDH ILFIAAGAFH LCKPSDLIPE LQGRFPLRVE LESLNEETLY KILTQTKNSL LRQYEALLSV EGMKLTFEDE AIKAIAKLAH RANEIAEDIG ARRLHTVIEK ILEDVSFSAN EYKDKEFIVT SKLVHEKLDT IVENDDLSRY IL
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