| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0715 |
|---|
| Symbol | |
|---|
| ID | 3764348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 735942 |
|---|
| End bp | 737492 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_393229 |
|---|
| Protein GI | 78776914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGATT TATATGAAGA GAAAAAAACA AAAAGTTTTA ATTTTTTTCT ACTTATTGCT
GCTATCCCGA TAGCTGGTGT AATAATTATA TTTTCTATTA TGGCTAAAAA CAGACAAGAT
AAAATAGAGT TTACAAAACT TGAACTTTGC GGAATAGAAG TAATAGCTGA AATACAAAAA
AGCGTTTTGG ATATTCAAAA AATAAGAGCA CTAACCTCAA TAGAAAACCC AAATAGTGAT
ACTTTAAAGA AGCTAGAAAT AAAAAAAGAA GATATTTTAA AGGGTATGAA TCTAATAGAG
AGTAAATTAT CAAAGATAGA CGATAGCATT ACTTTGAAAA AAGAGCTTTT GAGTTTTATA
AAATTTATAA AAGATAGTAA GCTAGACTCT CTGAATTTTG ATGAACTTAC TCAAATAGTT
GAAAATCTCA CATCTTATTC AAGTCGAATT TCTTACCATT CCAAACTCAT TTTAGATGAA
AATTTAGATA TATTTGTTTT AGTAAACAAT GTCGTTTTTC TGTTTGTAGA GCTAATAGAG
CATAATGGAC AAATTAGGGG AGTAGCAGTA AATACAACAA ATGGTAATAT AGATTTTAAC
CAAAGACATA AGATAATTAT GCGACTTGAT AAAATTGATG ATAAACTTAA AAAGCTTGAC
TTGAATCTCT TTTTATTAGG AGAGGTTGCT TATGCCAATA AGTTAAAAGA GAGTTATGAA
GATATGAAAG AAGCTCAAAG AGTGATAATA GATTTTACTA ATAATGAGTT GTTAAGAGAT
GATGCAATAG CTGTTGATTC TAATGGAATC TATGAGCAGA TAACTAAAAA CATAGATTCT
GTAATCGCTT TATACGAGAT AAATCTAAAT CTTTTAAGAG AAAATTTAGA AAAAAAACTA
AAAGAAAATC AAAAAAGTTT GATATTTATA GCTATTTTTG GATTTCTATC TATCATGTTT
GTCATAATCA TAAACAGAAT ATTTTATCTA AACAATAGAA AATATATAGA CAAGATTGAG
GAGTTAACTA TTACTGATGG TATGACATCT TTATATAATC GAAGATATTT TGATGAAATA
TTTGATAATT ATCTCCGTAG CAACCAAAGA ACTAAACAGG TGCCAGTATT TATTATCATG
GATATAGACC ACTTCAAAGA GTACAATGAT ACATATGGGC ATCAAGCGGG TGATGTAGCC
ATAAAAATAG TTTCAAAAGT GATGAAAACT TTTTTAAAAA GAGCAACAGA TATGGCATTT
AGACTTGGTG GAGAGGAGTT TGGCATCTTA TGCTCTGGCA TAAACGCAAT AGAAGCGCTC
CATTTAGCTC ATGATATAAG AAAGGGGATA GAAAATGAAA AAATTGAGCA TAAAAGCAGC
AAAGTAAATG AGTATTTAAC AATCTCTATC GGGATAATCG TAATTGAAGA GGGCAAGATA
AATAGCACCA AAGAGATATA TAGATGTGCA GACAAAGCTC TATACAAAGC AAAAGAAAAT
GGACGTAATC AAGCGGTATT ATATGATGCA AAAATGTTTT GCGATGATTA A
|
|---|
| Protein sequence | MQDLYEEKKT KSFNFFLLIA AIPIAGVIII FSIMAKNRQD KIEFTKLELC GIEVIAEIQK
SVLDIQKIRA LTSIENPNSD TLKKLEIKKE DILKGMNLIE SKLSKIDDSI TLKKELLSFI
KFIKDSKLDS LNFDELTQIV ENLTSYSSRI SYHSKLILDE NLDIFVLVNN VVFLFVELIE
HNGQIRGVAV NTTNGNIDFN QRHKIIMRLD KIDDKLKKLD LNLFLLGEVA YANKLKESYE
DMKEAQRVII DFTNNELLRD DAIAVDSNGI YEQITKNIDS VIALYEINLN LLRENLEKKL
KENQKSLIFI AIFGFLSIMF VIIINRIFYL NNRKYIDKIE ELTITDGMTS LYNRRYFDEI
FDNYLRSNQR TKQVPVFIIM DIDHFKEYND TYGHQAGDVA IKIVSKVMKT FLKRATDMAF
RLGGEEFGIL CSGINAIEAL HLAHDIRKGI ENEKIEHKSS KVNEYLTISI GIIVIEEGKI
NSTKEIYRCA DKALYKAKEN GRNQAVLYDA KMFCDD
|
|---|
| |