| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0354 |
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| Symbol | |
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| ID | 3764735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | + |
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| Start bp | 352228 |
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| End bp | 356739 |
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| Gene Length | 4512 bp |
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| Protein Length | 1503 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, subunit beta-prime |
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| Protein accession | YP_392870 |
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| Protein GI | 78776555 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT TAGTACCTAT TGAAGTAACA GAAGATAGAA GACCAACTGA TATAAAGCAG
ATACAGTTTC GTTTGGCTTC TCCTGAAAAA GTGATGTCTT GGAGTCACGG AGAAGTAAAA
AAACCTGAAA CTATTAACTA TCGCACACTC AAACCTGAGC GTGACGGACT TTTTTGTGCA
AAAATATTTG GACCAGTTAG AGACTATGAG TGTCTTTGTG GTAAATACAA AAAAATGCGT
TATAAAGGTG TTGTGTGTGA GAAGTGTGGT GTTGAAGTAA CAAGCACAAA AGTTCGCCGT
ATCCGTATGG GGCATATAGA ACTTGTAACT CCAGTAGCAC ATATTTGGTA TGTGAGTTCA
TTACCTTCTC GTATAGGTAC TCTTTTAGGC ATTAAGATGA AAGACCTTGA GCGCGTACTA
TATTATGAAG CATATATAGT TGAGAGCGGT GGTGAAGCAT ATTATGATGC AGAAGCAAAA
ACGCCAGTTT TAAAATATGA TGTTTTAAAT GAAGAGCAGT ACCGTACTCT TGTATCTAGA
TTTGGTGAAC TTGGTTTTAA AGCTCGTATG GGTGGAGAAG TTGTTCGCGA TCTTCTTGAT
TCTATCGATT TAGTTGATCT ATTTACTCAA CTAAAAGAAG ATATTGAACT TACAAAAAGT
GAAGCAAAAA CAAAAACTAT TGCTAAGAGA CTAAAAGTAA TCGAGTCATT TTTAAATTCA
GGAAATAACC CTGCATGGAT GATGTTAACT GTTTTACCTG TCCTTCCACC TGATTTGAGA
CCACTTGTAA GTCTTGATGG TGGTAAATTT GCTGTTTCAG ATGTAAATGA CTTATATCGT
CGTGTAATAA ACCGTAATCA ACGTCTTAAA CGTCTTGTTG AGCTTGAAGC ACCAGAAATT
ATTGTTAGAA ATGAGAAGCG TATGCTTCAA GAATCAGTTG ATGCACTGTT TGATAACGGT
CGTCGTGCAA ATGCTGTTAA GGGAGCTAAC AAACGTCCGC TTAAGTCTTT GAGCGAAATT
ATTAAAGGTA AACAGGGTCG TTTTAGACAA AACTTGCTTG GTAAACGTGT TGACTTCTCA
GGTCGTACAG TAATCGTTGT TGGACCATCT CTATCTATGG ATGAGTGTGG ATTACCTAAA
AAAATGGCAC TAGAGCTGTT CAAGCCACAT TTGATTGCAA AACTTGAAGA TAAGGGTTAT
GCAACAACTG TTAAAGCTGC GAAAAAGATG ATTGAAGATA AAACTAATGA AGTTTGGGAA
TGTTTGGCTG AGATAGTTGA TGGCTATCCA GTACTACTAA ACCGTGCACC AACGCTTCAT
AAGCTCTCAA TTCAAGCATT TCACCCTAAG CTAATTGATG GAAAAGCTAT ACAGCTTCAT
CCATTGGTTT GTGCTGCTTT TAACGCCGAC TTTGACGGTG ACCAGATGGC TGTTCACATT
CCTTTAAGTT CTGCTGCAAT TGCTGAAGCA AAAGTATTAA TGCTAGCTTC TATGAATATT
CTTCTTCCTG CATCAGGAAA GGCTATTGCT ACACCATCTC AAGATATGGT TCTTGGAATT
TACTACATTA CATTAGAGAA AAATGGTGTA AAAGGTTCAA ATAAACTTTT TGCAAACGTA
GATGAAGTAA GAATTGCTAT TGAGCATGAT GCTCTTGATA TTCATGCAAA AGTAAGAACA
AGAGATGATG GAAGAATTAT TCACACAACA GCAGGAAGAA TGCTCTTAAA AGCTATTTTA
CCTAATTTTG TTCCATCAGA ACTTTGGAAT AGAGTTATGA AGAAAAAAGC TATTAATGAA
GTGGTTGATT ACGTTCAAAA ACATGGCGGT ATAGGCGTAA CAGCAGGTTT CTTAGATAGA
CTTAAGAACT TAGGATTTAA ACATGCAACT GAAGCTGGTA TATCTATCTC TATTGATGAT
ATAAAAATAC CTGCAGGAAA AGAAGCTAAA ATCGCTGAAT CAAAAAATAG AGTTTTTGAG
ATTCAAAAAC AGTTTGAAGC GGGTCTTTTA ACTGAACAAG AGAGATATAA TAAAATTATT
GATGTTTGGA CTGATACAAA CAACACGCTA GCGACTCAGA TGATGGATTT AGTTCAAACA
GACAAAGCTG GATTTAACTC GATTCATATG ATGGCAGACT CAGGTGCTCG TGGTTCGGCT
GCACAAATTC GTCAGCTTGC TGGTATGCGT GGACTTATGG CAAAACCAAG TGGTGAGATT
ATTGAGACAC CAATTATTTC TAACTTTAAA GAGGGATTAA ATGTTGTTGA GTACTTTATT
TCAACACACG GTGCTAGAAA AGGTCTTGCC GATACTGCTC TAAAAACAGC AAATGCGGGT
TATCTTACTC GTAAACTTGT TGACGTTGCT CAAAATGTTA AGATTGTTGA ACATGATTGT
CATACTCACG AGGGTATAGA GATTTCTGAT ATTAGTGATC AAAATACTCT AATTGAATCT
TTAGAAGATA GATTAAATGG TAGAGTTTTA GCAGATGATG TAATTGACCC AATAAGCAAT
GAGATACTCT TTGCAGAGGG AACACTTCTT GATGAAGTTA GTGCTAAAGT CATAGCAGAA
GCTGGAATTA AGACGGCATA TATCAGAACT CCAACTACAT GTAAGAGTGA AAATGGTATT
TGTGCACTAT GTTATGGTGT GAACCTAGCA ACAGGGCAGA TAGTTCGCAG AGGAGAAGCT
GTTGGTATTA TTGCTGCTCA GTCAATTGGT GAACCTGGTA CTCAGCTAAC ACTTAGAACA
TTCCACGTTG GGGGAACTGC AAGTTCAACT GCGCAAGAGA GACAAGTTGT AGCTGAAAAA
GAGGGCTTTA TTCGTTACTA TAACCTAAAA ACTTATGTTT CAAAAGAGGG TAGAAATATA
GTAGCAAACC GTAGAAATGC AGCTGTCTTA TTAGTAGAGC CAAAGATTAA AGCTCCATTT
AGCGGTCGTG TTGAAATTCA AACTGTTCAT GATGAAGTAA TTATTAGTGT TTCATCAAAG
ACAGATACAA TTCGTTATGT ATTGCGTAAA AATGAGATTG CTAAACCAAA TGAGTTAGCT
GGAGTTGGTG GACAAATAGA GGGTAAATAT TACTTCCCTT ATGAAAGTGG TGCAGAAGTT
CAAGAATATG AGTCAATAGT TGAGACAATA AAAGATGGTT GGAATGTTCC AAGTCGTATT
CCTTATGCTT CTGAAGTGTT AGTTGCAAAT GGCGCACCTG TTACTCAAAA GATTTTTGCA
AAAGAGGATG GAGTTGTTAA ATACTTCCTT CTTAGAGGTG ACTATTTAGA GAGATTTGAA
GGATTAAAAG CTGGTTATGA AGTTATTGAA AAAGGACTTT TTGCAACTGT TGTAGATTCA
AATAATAGAG AAGCAGTACG TCATTACATT GCTCGTGGTT CTATTATTGT AGCTGAGGAC
GATGCTGTAG TTGATCCAAA AACTCTTATC GCTAAACCTA AAAATGATGA ATCAACAGTA
ATAGCAGAGT GGGATCCATA CTCTAATCCT ATTATTTCTG AGACTAGCGG TACAGTTAAA
TTTGAAGATA TTATTATTGG AACAACAGCA ACTGAACAGT ATGATGAGTT AACTGGTAAA
ACACGTTTAA TGATTAGTGA TCATGTTCCT GCTGAATATA AGCCAACAAT AGTACTTGCT
AGCGAAGATG GCGAACTATT AAGATACCAA GTTCAATCAA AAACTTCTAT TTATGTAGAA
GATGGAGCTA AAGTTAAAGT TGCTGATATT ATTGCAAAGA CACCAAAAGC ACTTCAAAAA
TCAAGCGATA TTACAGGGGG TCTTCCTCGT GTAAGTGAAC TTTTTGAAGG TCGTCGTCCA
AAAGCAACAG CACTGATTTC TGAGATAGAT GGTGTTGTAT CATTTGGAAA ATCTCTAAGA
GGTAAAATTA GAATCATAGT TGCTTCTGAT AATGGAATAT TAAAAGAGTA TTTTGTTGAT
AAATCACACA CTCCAGTTGT AAATAGCGGT GACTTTGTGC ACGCTGGTGA GAGATTAACA
TCTGGTATTA TCTCTTCACA TGAGCTATTA CGCATTATGG GTGTGAAAAC ACTTTATAAC
TACCTAGTAA GTGAAGTACA GCAAGTTTAC CGTTCTCAAG GTGTTAATAT TTCAGATAAG
CATATTGAAG TTATATTTAC ACAGATGTTA AGACAGGTTA AAATTCTTAA ATCTGGCGAT
ACTAAGTTTA TAGAAGGTGA TTTAATCTCT AAAGTTAAGT TTGCGCAAGA GAATGAAAAA
ATTATAAAAC TTGGCGGTCG TCCAGCTATT GCTGAGCCAT TCTTGGTTGG TATTACAAGA
GCCGCTGTAT CAGCTGATAG TATTATCTCT GCTGCATCTT TCCAAGATAC TACAAAAGTA
TTAACAGAAG CTGCAGTTAG TGCTAAAGTT GATGATTTAA ATGATTTAAA AGAGAACGTA
ATTATTGGTC GTACTATTCC TGTTGGAACT GGTATATATA AAGATCAAGA GATTATGTTT
GGATACAATT AA
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| Protein sequence | MSKLVPIEVT EDRRPTDIKQ IQFRLASPEK VMSWSHGEVK KPETINYRTL KPERDGLFCA
KIFGPVRDYE CLCGKYKKMR YKGVVCEKCG VEVTSTKVRR IRMGHIELVT PVAHIWYVSS
LPSRIGTLLG IKMKDLERVL YYEAYIVESG GEAYYDAEAK TPVLKYDVLN EEQYRTLVSR
FGELGFKARM GGEVVRDLLD SIDLVDLFTQ LKEDIELTKS EAKTKTIAKR LKVIESFLNS
GNNPAWMMLT VLPVLPPDLR PLVSLDGGKF AVSDVNDLYR RVINRNQRLK RLVELEAPEI
IVRNEKRMLQ ESVDALFDNG RRANAVKGAN KRPLKSLSEI IKGKQGRFRQ NLLGKRVDFS
GRTVIVVGPS LSMDECGLPK KMALELFKPH LIAKLEDKGY ATTVKAAKKM IEDKTNEVWE
CLAEIVDGYP VLLNRAPTLH KLSIQAFHPK LIDGKAIQLH PLVCAAFNAD FDGDQMAVHI
PLSSAAIAEA KVLMLASMNI LLPASGKAIA TPSQDMVLGI YYITLEKNGV KGSNKLFANV
DEVRIAIEHD ALDIHAKVRT RDDGRIIHTT AGRMLLKAIL PNFVPSELWN RVMKKKAINE
VVDYVQKHGG IGVTAGFLDR LKNLGFKHAT EAGISISIDD IKIPAGKEAK IAESKNRVFE
IQKQFEAGLL TEQERYNKII DVWTDTNNTL ATQMMDLVQT DKAGFNSIHM MADSGARGSA
AQIRQLAGMR GLMAKPSGEI IETPIISNFK EGLNVVEYFI STHGARKGLA DTALKTANAG
YLTRKLVDVA QNVKIVEHDC HTHEGIEISD ISDQNTLIES LEDRLNGRVL ADDVIDPISN
EILFAEGTLL DEVSAKVIAE AGIKTAYIRT PTTCKSENGI CALCYGVNLA TGQIVRRGEA
VGIIAAQSIG EPGTQLTLRT FHVGGTASST AQERQVVAEK EGFIRYYNLK TYVSKEGRNI
VANRRNAAVL LVEPKIKAPF SGRVEIQTVH DEVIISVSSK TDTIRYVLRK NEIAKPNELA
GVGGQIEGKY YFPYESGAEV QEYESIVETI KDGWNVPSRI PYASEVLVAN GAPVTQKIFA
KEDGVVKYFL LRGDYLERFE GLKAGYEVIE KGLFATVVDS NNREAVRHYI ARGSIIVAED
DAVVDPKTLI AKPKNDESTV IAEWDPYSNP IISETSGTVK FEDIIIGTTA TEQYDELTGK
TRLMISDHVP AEYKPTIVLA SEDGELLRYQ VQSKTSIYVE DGAKVKVADI IAKTPKALQK
SSDITGGLPR VSELFEGRRP KATALISEID GVVSFGKSLR GKIRIIVASD NGILKEYFVD
KSHTPVVNSG DFVHAGERLT SGIISSHELL RIMGVKTLYN YLVSEVQQVY RSQGVNISDK
HIEVIFTQML RQVKILKSGD TKFIEGDLIS KVKFAQENEK IIKLGGRPAI AEPFLVGITR
AAVSADSIIS AASFQDTTKV LTEAAVSAKV DDLNDLKENV IIGRTIPVGT GIYKDQEIMF
GYN
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