7 homologs were found in PanDaTox collection
for query gene Suden_0234 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0234  XRE family transcriptional regulator  100 
 
 
83 aa  169  2e-41  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.000284425  n/a   
 
 
-
 
NC_013512  Sdel_0931  helix-turn-helix domain protein  43.37 
 
 
85 aa  75.1  0.0000000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1121  helix-turn-helix domain protein  47.69 
 
 
88 aa  70.9  0.000000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000765113  n/a   
 
 
-
 
NC_008599  CFF8240_0305  XRE family transcriptional regulator  39.24 
 
 
86 aa  66.2  0.0000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0455  helix-turn-helix domain protein  41.56 
 
 
86 aa  65.5  0.0000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1425  XRE family transcriptional regulator  39.19 
 
 
83 aa  55.5  0.0000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1352  XRE family transcriptional regulator  39.51 
 
 
89 aa  54.7  0.0000004  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00595339  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>