| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4589 |
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| Symbol | |
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| ID | 5061079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5180488 |
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| End bp | 5181075 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476856 |
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| Product | single-stranded nucleic acid binding R3H domain-containing protein |
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| Protein accession | YP_001161395 |
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| Protein GI | 145597098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0441693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000461886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGAGA CCAGCACCCC CCGCGCAGAC GAGTCCCAGG ACGCCGAGGG GACGGAGACG
ACGGCGAGGG GCCAGACCGA GGCGGCCGAG GCCGATTCCG GCGGCACGGA GCAACGGTCC
GCCGGCGAGG GCGATCTGTT CCGGCAGAGT GAGATCGCCG CCGACTACGT GGAGGGCCTG
CTCGACATCC TCGACTACGA CGGGGACATC GACGAACTGG TTTCCGGCGG GCGCCCGGTC
GTGGAGGTGG TCGGCGGCCG GCTACAGAAC CTGGTTGGTC AGCGCGGCGC CACCCTGGAG
GCGCTTCAGG AACTCACTCG ACTTGCGGTC TTCCGGCAGA CCGGCACCCC CAGCCGGCTG
CTGCTCGACG TGGGCGGCTA TCGGGCGGGC CGTCGTAAGG AGCTCGCGGC GGTGGCGAAG
AACGCCGTCG AGAAGGTTAA GGAGCACGGC GAGTCGGTTC GGCTGGAGCC CATGTCCGCC
TTCGAGCGGA AGTGTGTGCA CGACGTGGTC AACGCCATCG ACGGCGTGGC GAGCGAGTCC
GAGGGCGTCG AGCCGAGCCG GCGTATCATC GTCCGGCCGG CGGACTGA
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| Protein sequence | MTETSTPRAD ESQDAEGTET TARGQTEAAE ADSGGTEQRS AGEGDLFRQS EIAADYVEGL
LDILDYDGDI DELVSGGRPV VEVVGGRLQN LVGQRGATLE ALQELTRLAV FRQTGTPSRL
LLDVGGYRAG RRKELAAVAK NAVEKVKEHG ESVRLEPMSA FERKCVHDVV NAIDGVASES
EGVEPSRRII VRPAD
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