| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4539 |
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| Symbol | |
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| ID | 5061029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5126105 |
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| End bp | 5129308 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476806 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001161345 |
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| Protein GI | 145597048 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAT GCCTCGTGCC TCCGATCAAC GCCGCACCCC CCGGTGGCCT CCCGTCCTTC
GTCGCGGACC TACACATCCA CTCGAAGTAC TCGCGGGCCT GCAGCCGCGA TCTCACCCTG
CCGAACCTCG CCTGGTGGGC TCGGCGTAAG GGCGTCGCCG TTCTCGGCAC CGGCGATTTC
ACCCACCCGG CCTGGTACGA CCACCTCCGG GAGACCCTGC ACCCGGCGGA GCCGGGCCTG
TACCGGCTCG CTCCGGAGGC CGAGCGGGAG ATCGCACGCC GGCTACCGCC GAGACTCGCC
GACGAGGCGG AGAACGCCCC GGTACGGTTC ATGCTCAGCG TCGAGATCTC CACGATCTAC
AAACGCGACG ACCGGACGCG TAAGGTGCAC CACCTGGTAT ACCTACCGGA CCTCGAGGCG
GTGGCCCGGT TCAACACGGC ACTCGGACGA ATCGGCAACC TCGGCTCGGA CGGCCGGCCG
ATCCTCGGCC TGGACTCCCG CGACCTGCTG GAGATCACCC TTGCGGCGAG CCCGGACGGC
TACCTCGTAC CGGCGCACAT CTGGACGCCA TGGTTCTCTG CCCTCGGCTC CAAGTCCGGC
TTCGATGCGA TCGCCGACTG CTACGCCGAC CTGGCCGAGC ACATCTTCGC GGTGGAGACC
GGCCTCTCCT CCGACCCGGA GATGAACTGG CGGGTCGGCA GCCTCGACCG CTACCAGCTG
GTGTCGAACT CCGACGCCCA CTCCCCGCCC GCGCTCGCCC GAGAGGCAAC GGTCTTCACT
GCCGCCCGCG ACTACTTCGC CATCCGGGAA GCGCTGCGGA CCGGCGACGG CCTGGCCGGG
ACGATCGAGT TCTTCCCGGA GGAGGGGAAG TACCACGCGG ACGGCCACCG ACTCTGCGGC
GTCAACTGGG CACCGGAGCA GACCCGGGCA GCCGGCGGGC GCTGCCCGGA GTGCGGCAAG
CCGCTGACCG TCGGCGTCCT CAACCGGGTG GAGGAGCTGG CCGACCGACC CCCGGGGCAC
CGGCCGGCGC ACGCCCGTGA CGTCACCCAC CTGGTGCCGC TGGCCGAACT CCTCGGGGAG
ATCAACACGG TGGGGGCGCG ATCGAAGAAG GTCGCGGGCA AGCTCAACGA CCTGATCGCC
GCGCTCGGTC CGGAGCTGGA GATCCTCACC CGGACGCCGC TTGCGGAGAT CGACCGGGTC
GGCGGCGATC TCCTCGCCGA GGGCATCCGC CGGCTTCGCC GGGGTGAGGT CCGCCGGGTG
TCGGGCTTTG ATGGCGAGTA CGGCGTCATC ACCCTCTTCG ACCCAACCGA ACTCCGCCCC
GGCGGGGGCG CGGCGGCGCA GGAGACGCTC TTCGACATAC CCGCCGTGCC GGAGCAGCGC
CGGCCCACGG AGCCGACCCC GAAACCGAAG GCCCGTCGCC CGGCGACGAA ACCGGAGCCG
AGGCGGGCCA GCCCACCCCC GCCGCCGATC GCGCCACCCC CCTCGCCACA CGAGCCCTTC
GAGCCGATGC TGTCCGGAAT GGAGGAGGTC GGCACGGGTC TGCTCGACCG GCTGGACGCG
ATGCAGCGGG TGGCCGCGTC CGCGCCCGGC GGACCACTGC TGATCGTGGC CGGTCCGGGC
ACCGGCAAGA CCCGTACGCT GACGCACCGA ATCGCGTACC TCTGCGCGGA GCTGAACGTC
TTCCCGGAGC GCTGCCTGGC CATCACCTTC ACCCGGCGAG CCGCCGAGGA GCTGCGGCAC
CGACTCGACG GACTGCTCGG GCCGGTCGCG GAGGACGTCA CCGTCGGCAC GTTCCACTCC
GTCGGCCTAC AGATCCTGCG GGAGAACCGT GAGGCCGCCG GGCTGCCGGT GGACTTCCGG
ATCGCCGACG ACGCGGACCG CGCCGCCGCC CGATCCGAGG CCGGTGACGA CCCCGACACC
TACCTGGCGC TGCTCCGCAA GCAGGACCTG ATCGACCTTG ACGAGCTGCT CACCCTGCCA
CTGGCGCTGC TGCGGGCCGA CCGGCGGTTG GCCGACTCCT ACCGCGACCG GTGGCAATGG
ATCTTCGTTG ACGAGTACCA GGACGTCGAT GAGGTGCAGT ACGAGCTGCT CCGGCTGCTC
AGCCCCGCCG ACGGGAACCT CTGCGCGATC GGCGACCCGG ATCAGGCGAT CTACTCCTTC
CGGGGTGCCG ACGTCCGCTA CTTCCTGCGC TTCTCGCAGG ACTTCACCGA TGCCCGGCTG
GTCCGGCTGA ACCGCAACTA CCGTTCGTCG GCACCGATCC TGGCCGCCGC GGTACAGGCG
ATCGCTCCCT CGTCGCTGGT CCGGGGCCGT CGGCTGGACC CGGCCCGGCT CGACCCGGAG
GCCCCCCTGC TTGGCCGGTA CGCGGCCGCC TCCGTCGCCG ACGAAGCCGC CTTCGTCGCC
CGTACGGTGG ACGAGTTGGT CGGTGGGCTG TCGCACCGCT CACTGGACTC GGGACGAATC
GACGGTGCCT CGACGACGCT CTCGTTCTCC GACATCGCGG TGCTCTACCG CACCGACGCC
CAGGCCGCGC CGATCGTCGA CGCGCTGTCC CGGGCGAATA TCCCGGTACA AAAGCGCTCC
CATGACCGGC TCCGCGACCG CCCCGGCGTC GCCGACATCG CCCGGGAACT GCGGCACACC
GGCGACGTTG ACAGCGCTCT GCCGGCCCGG GTTCGGCTCG CCGGACAGGT GGTCGCGCAA
CGGTTCGCCA CCCCCACCCT CGACGGTTCG GGCACCGTCG GGCCGGCCGA CGTACGGGTG
GCGGTCGACC TGCTCACCCC ACTGGCTCGG CGCTGCGGCG ACGACCTGGA CCTGTTCCTG
TCCCAGTTGG CCACGGGGGC GGAGGTGGAC GCCCTCGATC CGCGTGCGCA GGCGGTCACC
CTACTCACTC TGCACGCCGC CAAGGGGTTG GAGTTCCCGG TGGTCTTCCT GGTCGGCGCC
GAGGACGGAC TCTTGCCCCT GCGCTGGCCC GGTAGCGAGC CGGATGATGA CGCGGTCGCC
GAGGAGCGAC GCCTCTTCTT CGTTGGGGTG ACCCGCGCGC AGGATCGGCT CTACCTCAGC
CATGCCGCCC GGCGATTCCG GCACAGCACC GAGTACGACT GTCGCCCCTC CCCATTCTTG
TCCACAATTG ACCCGGGACT CTTCGAACGC CTCGGTGAAC CGGAACCCCG CCGCCCCAAG
GACCGCCAGC TCCGTCTGAT CTGA
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| Protein sequence | MARCLVPPIN AAPPGGLPSF VADLHIHSKY SRACSRDLTL PNLAWWARRK GVAVLGTGDF
THPAWYDHLR ETLHPAEPGL YRLAPEAERE IARRLPPRLA DEAENAPVRF MLSVEISTIY
KRDDRTRKVH HLVYLPDLEA VARFNTALGR IGNLGSDGRP ILGLDSRDLL EITLAASPDG
YLVPAHIWTP WFSALGSKSG FDAIADCYAD LAEHIFAVET GLSSDPEMNW RVGSLDRYQL
VSNSDAHSPP ALAREATVFT AARDYFAIRE ALRTGDGLAG TIEFFPEEGK YHADGHRLCG
VNWAPEQTRA AGGRCPECGK PLTVGVLNRV EELADRPPGH RPAHARDVTH LVPLAELLGE
INTVGARSKK VAGKLNDLIA ALGPELEILT RTPLAEIDRV GGDLLAEGIR RLRRGEVRRV
SGFDGEYGVI TLFDPTELRP GGGAAAQETL FDIPAVPEQR RPTEPTPKPK ARRPATKPEP
RRASPPPPPI APPPSPHEPF EPMLSGMEEV GTGLLDRLDA MQRVAASAPG GPLLIVAGPG
TGKTRTLTHR IAYLCAELNV FPERCLAITF TRRAAEELRH RLDGLLGPVA EDVTVGTFHS
VGLQILRENR EAAGLPVDFR IADDADRAAA RSEAGDDPDT YLALLRKQDL IDLDELLTLP
LALLRADRRL ADSYRDRWQW IFVDEYQDVD EVQYELLRLL SPADGNLCAI GDPDQAIYSF
RGADVRYFLR FSQDFTDARL VRLNRNYRSS APILAAAVQA IAPSSLVRGR RLDPARLDPE
APLLGRYAAA SVADEAAFVA RTVDELVGGL SHRSLDSGRI DGASTTLSFS DIAVLYRTDA
QAAPIVDALS RANIPVQKRS HDRLRDRPGV ADIARELRHT GDVDSALPAR VRLAGQVVAQ
RFATPTLDGS GTVGPADVRV AVDLLTPLAR RCGDDLDLFL SQLATGAEVD ALDPRAQAVT
LLTLHAAKGL EFPVVFLVGA EDGLLPLRWP GSEPDDDAVA EERRLFFVGV TRAQDRLYLS
HAARRFRHST EYDCRPSPFL STIDPGLFER LGEPEPRRPK DRQLRLI
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