| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4473 |
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| Symbol | |
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| ID | 5060963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5064707 |
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| End bp | 5065597 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476740 |
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| Product | transketolase, central region |
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| Protein accession | YP_001161279 |
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| Protein GI | 145596982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0113424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACA CCTTCGTTGA CACCACCACG ACGCTGCTGG CCGACGACCC GCGCACCGCG
CTGGTGCTGG CCGACATCTC CGCCGCCCTC TTCACCCCGG CGGCGGCCCG GCACCCGGAC
CGGGTCCTGA ACGTCGGGAT CCGGGAGCAG CTGATGGTCG GGGTAGCCGG CGGGCTGGCG
TTGACCGGCC TGCGGCCGAT CGTGCACACC TACGCGCCGT TCCTGGTCGA GCGAGCGTAC
GAGCAGCTCA AGCTCGACCT GGACCACCAG GGCGCGAGCG CGGTGCTGGT CAGCGTGGGC
GCCTCGTACG ACCGCCCGGA ATCGGGCCGG ACCCACCTGT CGCCGGCAGA TGTCTCGCTG
ATCGACACCC TGCACGGCTG GACGGTGCAC GTACCCGGCC ACCCCGGCGA GGTGGCGCCG
ATGCTGCGGA CGGCGGTAGC CGCGGAGACC TCGGCATACC TGCGGCTCTC CGTACTCAGC
AACGACCGGC CGCTGGGCAG CGACGGGGCG TTGCAGGTGG TACGGGACGC CGGGCCGGGA
GCGCCCCTGG TGGTGGCCGT CGGGCCGACC CTGGACGCGG CCACCGCGGC ACTCGCCGAC
CTGCCCGTCA CCGTGGCGTA CACCAACCGG CCGCGGCCGT TCGACACCGC CGGGCTCCGC
GACCGGGCCG GCACCGACGT GATCCTGGTC GAGCCCTACC TCGCCGGGAC CTCCAGCCGG
GTGGTCTCGG CGGCGCTGGC GGACCGCCCG CACCGGCTGC TCGCGCTCGG TGTCGGGCGT
GAGGACCTGC GACGGTACGG TTCGGCCGAC GACCACACCC GCTGGCACGG CCTGGACGCG
TCGGGGCTAC GGCGATCGGT GCTGGACTTC GTCTCGCCGG CGCTGCGCTG A
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| Protein sequence | MRDTFVDTTT TLLADDPRTA LVLADISAAL FTPAAARHPD RVLNVGIREQ LMVGVAGGLA
LTGLRPIVHT YAPFLVERAY EQLKLDLDHQ GASAVLVSVG ASYDRPESGR THLSPADVSL
IDTLHGWTVH VPGHPGEVAP MLRTAVAAET SAYLRLSVLS NDRPLGSDGA LQVVRDAGPG
APLVVAVGPT LDAATAALAD LPVTVAYTNR PRPFDTAGLR DRAGTDVILV EPYLAGTSSR
VVSAALADRP HRLLALGVGR EDLRRYGSAD DHTRWHGLDA SGLRRSVLDF VSPALR
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