Gene Strop_4461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4461 
Symbol 
ID5060950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5054709 
End bp5055275 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID640476727 
Producthypothetical protein 
Protein accessionYP_001161267 
Protein GI145596970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.115228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGGAA GGCAGGTCAA GGGCGCGGCG GCGTACCTGG CGGTGGGCGC GCTGTTGGGT 
GCCGTGACCG GCTGCGGCAC CGACCGCGAA GAGCCTGTCG AGGTGGCGGG CGCGATTGAT
CAACCCGCCC CGACATCGCG GGAAGCGGGC GAGCGAAACG CTCGGAAAGC CGCGCTCGCC
GCCTATTCCG GATATCTTGC CGTGACCCGG GAAGCGAGTG GCGCCAGCGA CCCGCACCAC
CCGGAACTCA CCACCTACCT GGCCGACCCG TTGCTGACCC GGGTCCGGTA CACCCTCCGC
GCAGCCAAGG AACACGGCGC TGTCCGCATC GGCGCACTCC GTTCGGACCC CGTCGTGACC
GCCGTCGACA TCGCGAATGT CCCGCCCACC GTCGAGATCC AGGACTGCCT GGACGCGACC
GGCTGGCAGC TGGTCTACGC GGAAGACAAG CGGGTCGTGC CCGGTAGCCA GAGCACCCGG
CACCTGGCCA CCGCGACCGT GACCCGATAT CCGGACGGTC GATGGTTGAT CAATGCCGGC
GCCTCCCACG AGGACCAGCC GTGTTGA
 
Protein sequence
MGGRQVKGAA AYLAVGALLG AVTGCGTDRE EPVEVAGAID QPAPTSREAG ERNARKAALA 
AYSGYLAVTR EASGASDPHH PELTTYLADP LLTRVRYTLR AAKEHGAVRI GALRSDPVVT
AVDIANVPPT VEIQDCLDAT GWQLVYAEDK RVVPGSQSTR HLATATVTRY PDGRWLINAG
ASHEDQPC