Gene Strop_4394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4394 
Symbol 
ID5060880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4971516 
End bp4971980 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content71% 
IMG OID640476657 
Producthypothetical protein 
Protein accessionYP_001161200 
Protein GI145596903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.601015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCGG GGCATGCTGA GCTCGTCGGA TTCCGGCTGC CGGACGGAGC GCTGAAGACC 
GACGCCACAG CGCCGGCCGA CACCGTCGGT TACCGGGCCG GATGCAGTTG CGGCTGGATC
GGCACCCGGG ACTACCCGGC CGCCGACGAG GGGCGATGGA TGGCCACCTC CGAGTGGGGC
GGGCACATTC GGCCACTGCT GGCCGCCACT CCGCCCGGCT GGCTACTCAG CCGCTCCGAC
ACGCTGCGGG ACGGTGTCAC CGAACTGACC ACCACCTGGC CACTACAGGC GCTCGGCGTC
CTCGCCCAGG TGGAGCGCTG GCAGCGACCA CTCATCGAAC AGGCCGTGGT GCAGGCGCGG
GCGACCGGAC TCTCCTGGGC GGAGATCGGC AACGCGCTCG GCATCAGCCG CCAGTCCGCG
CACGAACGAT TCCGCAACGT CGCACCGCCG AAAAACCCCA GCTAG
 
Protein sequence
MVPGHAELVG FRLPDGALKT DATAPADTVG YRAGCSCGWI GTRDYPAADE GRWMATSEWG 
GHIRPLLAAT PPGWLLSRSD TLRDGVTELT TTWPLQALGV LAQVERWQRP LIEQAVVQAR
ATGLSWAEIG NALGISRQSA HERFRNVAPP KNPS