| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4360 |
|---|
| Symbol | |
|---|
| ID | 5060846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4938042 |
|---|
| End bp | 4939100 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640476623 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161166 |
|---|
| Protein GI | 145596869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGTAC GTCGTACGGC GATCGTTGCC GCCATCATGA GCGCAAGCCT GGTGGCGCCG
GTCCAGCCAG CCGTGGCCGC CCCAGCCAAC GAGATGCCCT TCGCGTCCGC GACCACTGTC
GGCATCCACA ACGCCTACGA ACAGACGGCC TTCGACTACC TGGCAGAGGC GCTGGACACC
GGCACCAGCC TGATCGAGAT CGACATCTGG CCGAACATTT TCACCGGGAA GTGGAAGGTC
AGCCACGATG AGCCGCTGAG TAACAACAAC AACTGCACCA CCGGATCAGC CCTCACCGAC
CTCTACACCG GTGGCAGGAA CAAACACTTC AGCGACTGCC TGGACAACAT CCGGGTCTGG
CTCGACGCTC ACCCCGACAG TGGCCCGCTC ATGATCAAGG TCGAGCCGAA GCTGGGCCTC
GCCACCGTCT TCGGTATGGG CGTGAATCAG GTCGACAACC TCGTCCGGAG CCGGCTCGGC
GATCGTGTCT TCCGCCCAGC GGACCTGCTG GCCAAGCCCG ACGGGGGTTG GTACGACTCC
CTCGACGAGG CGGCCCGGGC GGGGAACTGG CCCACCCGGG AAGAACTCGC CGGGCGCGTG
CTCCTTCACG TCGTACCCGG CACGGTGGAG AACCGCAATC CATTCGACTG GGCGCCCACC
AACGAGCAGT ACGCGGAGCA CCTTCGTGAC CTGGCGGCGG CAGGAGAGAT CGAGAAAGCG
CAGATCTTCC CCACCGCCAA GGGAACCGCT GGCGACGACC CTCGGGACCA GTACAAAGCC
AGCATTCGCC CCTGGTTCGT GGTGTTCGAC AGCGGGGCCT CCGGGTGGAT CAACCGGGAC
ACCACCTGGT TCGCGGAGAA CAACTACCTG CTCGTGATGA CCAGCGCCCA CTCGGTCGAT
CCGGCCATCA GCCGTACCAA CCCCACCGAG GAGGAGGCGC GGGACCGGCT GCTGCTCCTG
GCAGCCGCCA ATGCCAGCGT CATCACCAGC GACTGGACCC AGCTGCCGCA GATCCAGTCG
ATGGTTGTTC CGCGCGGGGG CCAGGGCGGG GTGTCGTAA
|
|---|
| Protein sequence | MLVRRTAIVA AIMSASLVAP VQPAVAAPAN EMPFASATTV GIHNAYEQTA FDYLAEALDT
GTSLIEIDIW PNIFTGKWKV SHDEPLSNNN NCTTGSALTD LYTGGRNKHF SDCLDNIRVW
LDAHPDSGPL MIKVEPKLGL ATVFGMGVNQ VDNLVRSRLG DRVFRPADLL AKPDGGWYDS
LDEAARAGNW PTREELAGRV LLHVVPGTVE NRNPFDWAPT NEQYAEHLRD LAAAGEIEKA
QIFPTAKGTA GDDPRDQYKA SIRPWFVVFD SGASGWINRD TTWFAENNYL LVMTSAHSVD
PAISRTNPTE EEARDRLLLL AAANASVITS DWTQLPQIQS MVVPRGGQGG VS
|
|---|
| |