Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4300 |
Symbol | |
ID | 5060785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4870093 |
End bp | 4872027 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640476562 |
Product | hypothetical protein |
Protein accession | YP_001161106 |
Protein GI | 145596809 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.908642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.295604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGG CCCGGGCTCG GACGGTGGCG CTACTGCTGG CTCTCGGCGT CCTCGCCGGG GCCACGGTCA GCTGGCCGGG GGTCGGCGCG GCGGCGGCAC CGGCCCCGGC GCCGACCGCA CCGGCCCCGG CCGGCGCCTG CACCACCGAG GAGTGGCAGG CCGACTTCCG CTCCTGCGTC TCCCGGCTCA AGGCGGTCGC CGAGGACGAC GTCACCTGCC GCAACGCCCC GACCCCGACG GCACCGGACT CCGGCCTCGC CGGTTGGTTC GCGGCCCGCC CGGACTCCGC GAAGGAAGAC GGTCGCAAGG GGTACTACAG CGACTACGGC TACGCGGGGT ACAGCTACAC CACCTACGAC ATCGACACCG GCTGCGCCAC CGCGGTGCTG CATCCGGACT ACAAGTTCAC CAACACGGTC GCCAACGGCG AGTTCATGAT CGCCACCGCG ATCGTCGGCG CCTCGAACGC CCTACGGGAG CGGGCCTGGG ATCCGCGGTC GATGTGGGGT TGGGCCGATC CGCTGGTGGA GCAGGCGACC ACGGCGGTCT ACCAGAAGGT GTTCAGCGTC TTCGGGATCG TCACCCTCTG CGTGGTCGGG CTCTACCTGC TCTGGCGTTC CCGCCAGTCG GACATGAGCA ACGCCATGAC GACCGCCGGC TGGGCCCTGC TCGTGATGGT GGCGGTGACC GCGCTGGCCG CCTGGCCGGT GAAGTCCGCC AACCTCGCCG ACGGCACCCT GGTCACCACG CTGGGGGTGG TCCACGACGC GGTCGGACCC GCCACCAAGG ACATCCCGCC GGACCAGTGC CCGGTCCCGA ATCCGGCGGC CTGCGCTGAC AACCGGCCAC CGGCGGTGCG GGCGAGCGAC ACGGCCACCG AGACGATGCT CTACCGGAAC TGGCTGCGCG GGGTGCTGGG CTCGGCCGAC AGTGAGACCG CGAAGAAGTA CGGGCCGGCG CTCTACGACG CGAAGTCCTT CTCCTGGGAG GAGACGGAGA AGCTCCGGGA GTTCCCGGCC ACCCGGGAGG CCACCATCCG GGCCAAGCAA CAACAGTGGG CGCGGGTCGC GCAGCAGGTC AAGCAGGAGG ATCCGGAGGC GTACGAGTAC CTCCAGGGGC TCCGGGACAT GGACCGGGTC GGTGCCGGCT TCATCGCGGT GCTCGCCGCG CTGCTCTTCG CGATGTTCGA TCTCACCGCG TCGGTGCTGG TGCTGCTGGG CTTCCTACTC TTCCGGTGGG CGGTGATCGC CGCGCCGATC CTCGGCACCA TCGGCCTGCT GCGCCCGGCG AGCGCCGGGC TGCGCCGGCT GGGTAACGCC GTGGTCGCGG CGATCTTCAA CATCGCCATC TTCGGCACCG GTGCCGCGAT CTACCTCTTC GCCGTGGACC TCATCATGAG CACGCCGACC CTGCCCGGCT GGCTCCAGGT GGTGCTGGTC TGGCTCTGTG GCGTGGTCGG CTGGCTGCTG CTGCGCCCCT ACCGGCGGGT CACCCAGCTC GGCGGCAAGG GCGGCGGCGA GGCGGGTGGC TCGGCCGGCT CCTGGCACCG CCGGTTCTTC CGGGACATGC GCGCGGCGTC CCGCCTCGAC GCGGAGTCCC GCGGCACCGG CGAGCCGAGC TCGGGCCGCC GCGGCGCGGT GGTGGCGGAG CAGAGCCGGC TGCGGCCGGA GGCCCGGCAC GAGGACCTGA CGCCCTCAGC CGAGGGCGGG GCCCGGCCGG AGCACCGCGA GCGGCCGGGG GACGGGACGC CAACGTCCGG GGAGCGAGGC GCCACGGGCC GCACCACCCC CGCACCGCGG CAGCGGCGAG CGCCGGCGAG TTGGACCGAG CCGGAGGGCC CGCAGGAGAA CCCCTCCTTC GTCATCTACC GGCCCGGCAC GGTGGGGCCC GCGCCGGAAC GGAGCACTCC CCGGGTCCGC TCCGAGGCCC GGTGA
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Protein sequence | MAGARARTVA LLLALGVLAG ATVSWPGVGA AAAPAPAPTA PAPAGACTTE EWQADFRSCV SRLKAVAEDD VTCRNAPTPT APDSGLAGWF AARPDSAKED GRKGYYSDYG YAGYSYTTYD IDTGCATAVL HPDYKFTNTV ANGEFMIATA IVGASNALRE RAWDPRSMWG WADPLVEQAT TAVYQKVFSV FGIVTLCVVG LYLLWRSRQS DMSNAMTTAG WALLVMVAVT ALAAWPVKSA NLADGTLVTT LGVVHDAVGP ATKDIPPDQC PVPNPAACAD NRPPAVRASD TATETMLYRN WLRGVLGSAD SETAKKYGPA LYDAKSFSWE ETEKLREFPA TREATIRAKQ QQWARVAQQV KQEDPEAYEY LQGLRDMDRV GAGFIAVLAA LLFAMFDLTA SVLVLLGFLL FRWAVIAAPI LGTIGLLRPA SAGLRRLGNA VVAAIFNIAI FGTGAAIYLF AVDLIMSTPT LPGWLQVVLV WLCGVVGWLL LRPYRRVTQL GGKGGGEAGG SAGSWHRRFF RDMRAASRLD AESRGTGEPS SGRRGAVVAE QSRLRPEARH EDLTPSAEGG ARPEHRERPG DGTPTSGERG ATGRTTPAPR QRRAPASWTE PEGPQENPSF VIYRPGTVGP APERSTPRVR SEAR
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