Gene Strop_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4300 
Symbol 
ID5060785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4870093 
End bp4872027 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content73% 
IMG OID640476562 
Producthypothetical protein 
Protein accessionYP_001161106 
Protein GI145596809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.908642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.295604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGG CCCGGGCTCG GACGGTGGCG CTACTGCTGG CTCTCGGCGT CCTCGCCGGG 
GCCACGGTCA GCTGGCCGGG GGTCGGCGCG GCGGCGGCAC CGGCCCCGGC GCCGACCGCA
CCGGCCCCGG CCGGCGCCTG CACCACCGAG GAGTGGCAGG CCGACTTCCG CTCCTGCGTC
TCCCGGCTCA AGGCGGTCGC CGAGGACGAC GTCACCTGCC GCAACGCCCC GACCCCGACG
GCACCGGACT CCGGCCTCGC CGGTTGGTTC GCGGCCCGCC CGGACTCCGC GAAGGAAGAC
GGTCGCAAGG GGTACTACAG CGACTACGGC TACGCGGGGT ACAGCTACAC CACCTACGAC
ATCGACACCG GCTGCGCCAC CGCGGTGCTG CATCCGGACT ACAAGTTCAC CAACACGGTC
GCCAACGGCG AGTTCATGAT CGCCACCGCG ATCGTCGGCG CCTCGAACGC CCTACGGGAG
CGGGCCTGGG ATCCGCGGTC GATGTGGGGT TGGGCCGATC CGCTGGTGGA GCAGGCGACC
ACGGCGGTCT ACCAGAAGGT GTTCAGCGTC TTCGGGATCG TCACCCTCTG CGTGGTCGGG
CTCTACCTGC TCTGGCGTTC CCGCCAGTCG GACATGAGCA ACGCCATGAC GACCGCCGGC
TGGGCCCTGC TCGTGATGGT GGCGGTGACC GCGCTGGCCG CCTGGCCGGT GAAGTCCGCC
AACCTCGCCG ACGGCACCCT GGTCACCACG CTGGGGGTGG TCCACGACGC GGTCGGACCC
GCCACCAAGG ACATCCCGCC GGACCAGTGC CCGGTCCCGA ATCCGGCGGC CTGCGCTGAC
AACCGGCCAC CGGCGGTGCG GGCGAGCGAC ACGGCCACCG AGACGATGCT CTACCGGAAC
TGGCTGCGCG GGGTGCTGGG CTCGGCCGAC AGTGAGACCG CGAAGAAGTA CGGGCCGGCG
CTCTACGACG CGAAGTCCTT CTCCTGGGAG GAGACGGAGA AGCTCCGGGA GTTCCCGGCC
ACCCGGGAGG CCACCATCCG GGCCAAGCAA CAACAGTGGG CGCGGGTCGC GCAGCAGGTC
AAGCAGGAGG ATCCGGAGGC GTACGAGTAC CTCCAGGGGC TCCGGGACAT GGACCGGGTC
GGTGCCGGCT TCATCGCGGT GCTCGCCGCG CTGCTCTTCG CGATGTTCGA TCTCACCGCG
TCGGTGCTGG TGCTGCTGGG CTTCCTACTC TTCCGGTGGG CGGTGATCGC CGCGCCGATC
CTCGGCACCA TCGGCCTGCT GCGCCCGGCG AGCGCCGGGC TGCGCCGGCT GGGTAACGCC
GTGGTCGCGG CGATCTTCAA CATCGCCATC TTCGGCACCG GTGCCGCGAT CTACCTCTTC
GCCGTGGACC TCATCATGAG CACGCCGACC CTGCCCGGCT GGCTCCAGGT GGTGCTGGTC
TGGCTCTGTG GCGTGGTCGG CTGGCTGCTG CTGCGCCCCT ACCGGCGGGT CACCCAGCTC
GGCGGCAAGG GCGGCGGCGA GGCGGGTGGC TCGGCCGGCT CCTGGCACCG CCGGTTCTTC
CGGGACATGC GCGCGGCGTC CCGCCTCGAC GCGGAGTCCC GCGGCACCGG CGAGCCGAGC
TCGGGCCGCC GCGGCGCGGT GGTGGCGGAG CAGAGCCGGC TGCGGCCGGA GGCCCGGCAC
GAGGACCTGA CGCCCTCAGC CGAGGGCGGG GCCCGGCCGG AGCACCGCGA GCGGCCGGGG
GACGGGACGC CAACGTCCGG GGAGCGAGGC GCCACGGGCC GCACCACCCC CGCACCGCGG
CAGCGGCGAG CGCCGGCGAG TTGGACCGAG CCGGAGGGCC CGCAGGAGAA CCCCTCCTTC
GTCATCTACC GGCCCGGCAC GGTGGGGCCC GCGCCGGAAC GGAGCACTCC CCGGGTCCGC
TCCGAGGCCC GGTGA
 
Protein sequence
MAGARARTVA LLLALGVLAG ATVSWPGVGA AAAPAPAPTA PAPAGACTTE EWQADFRSCV 
SRLKAVAEDD VTCRNAPTPT APDSGLAGWF AARPDSAKED GRKGYYSDYG YAGYSYTTYD
IDTGCATAVL HPDYKFTNTV ANGEFMIATA IVGASNALRE RAWDPRSMWG WADPLVEQAT
TAVYQKVFSV FGIVTLCVVG LYLLWRSRQS DMSNAMTTAG WALLVMVAVT ALAAWPVKSA
NLADGTLVTT LGVVHDAVGP ATKDIPPDQC PVPNPAACAD NRPPAVRASD TATETMLYRN
WLRGVLGSAD SETAKKYGPA LYDAKSFSWE ETEKLREFPA TREATIRAKQ QQWARVAQQV
KQEDPEAYEY LQGLRDMDRV GAGFIAVLAA LLFAMFDLTA SVLVLLGFLL FRWAVIAAPI
LGTIGLLRPA SAGLRRLGNA VVAAIFNIAI FGTGAAIYLF AVDLIMSTPT LPGWLQVVLV
WLCGVVGWLL LRPYRRVTQL GGKGGGEAGG SAGSWHRRFF RDMRAASRLD AESRGTGEPS
SGRRGAVVAE QSRLRPEARH EDLTPSAEGG ARPEHRERPG DGTPTSGERG ATGRTTPAPR
QRRAPASWTE PEGPQENPSF VIYRPGTVGP APERSTPRVR SEAR