Gene Strop_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4273 
Symbol 
ID5060758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4840742 
End bp4841281 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content72% 
IMG OID640476535 
Productamino acid-binding ACT domain-containing protein 
Protein accessionYP_001161079 
Protein GI145596782 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.340897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.25045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACTGG GCGGGGAGAA TCCGGGGATG ACTGAGCTTG CCATCACCGT CATCGGTCGA 
GACCGGCCCG GCATCGTGGC CGATGTCGCC GAGGTGCTCG CCCGCCTGGG TGCGAACCTC
ACCGACAGCA CCATGACCCG GCTACGGGGG CATTTCGCGA TGACGCTGAT CTGCGTGGGC
CCGGCCGTCG CCGAGGCCGA GGCCGCGTTG GCGCCGCTCA CCGCCGACGG CCAGCTACTG
GCGACCGTTC GCGCGGTGGT GCCGGACGCG GAGCAGGCGT CGAACGGTGC GCCGTACGTG
CTGGCGGTGC ACGGCGCTGA TCGGTTGGGG ATCGTCGCCG CCATGACCCG GGTGCTCGCG
GAGGTGGGCG GCAACGTCAC GGACCTGAGT ACCCGGCTCG CCGGCGCGCT CTATGTCGTC
GTCGCGGAGG TCGAGCTGCC GCCGGACGCG GCCGAGCAGG TGACGGCCCG GTTGGCGTCA
ACCGCCGCCG AACTCGGGGT GGAGGTAACC CTCCGGCCGG CAGACCCGGA CCTGTTGTGA
 
Protein sequence
MGLGGENPGM TELAITVIGR DRPGIVADVA EVLARLGANL TDSTMTRLRG HFAMTLICVG 
PAVAEAEAAL APLTADGQLL ATVRAVVPDA EQASNGAPYV LAVHGADRLG IVAAMTRVLA
EVGGNVTDLS TRLAGALYVV VAEVELPPDA AEQVTARLAS TAAELGVEVT LRPADPDLL