Gene Strop_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4214 
Symbol 
ID5060698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4779192 
End bp4779773 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640476475 
Producthypothetical protein 
Protein accessionYP_001161020 
Protein GI145596723 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.862129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAG CCCTCGTAGT GTCGTTTGAA CTCCAGCCCG TCCTGACCAG CGACCTGATT 
GCCGTACGGC CACTGCGGCC GGCGGATTTC GATGAGCTGT TCGCTGTCGC CGCTGACCCG
CTGTTGTGGG AACAGCATCC GCAGCCAGAC CGGCACCAAA AGGATATTTT TCGTGCCTTC
TTCCTGGATG CTCTCGCCTC CGGAGGCGCG TTGGCAGTGG TCGACACCAA GGACCTCCGT
CTGATCGGAT CATCTCGATA TCACGGCTAT AGCCTGGATC GTCGCGAGGT CGAAATTGGT
TGGACCTTTC TCGCGCGTTC CCACTGGGGT GGGGTTTACA ACAAGGAGCT CAAGCGGCTC
ATGCTGGATC ACGCTTTTCG GTTCGTCGAT ACCGTCATTT TTCTTGTCGG TCCGGCGAAT
CTTCGTTCTC GGCGCGCGGT GGAGAAGCTC GGCGGGGTCC TGGCCGAGCC CGGCCAGAAC
AGGGCTGGTG CGCCTCACGT GCGCTACCGG ATTGAGGCCG TTAGGTGGTG GGGTGAGCGT
GAAGGTGCCG GCGGACCGAG CGGCGTCGGA AGTCTGGGCT GA
 
Protein sequence
MIGALVVSFE LQPVLTSDLI AVRPLRPADF DELFAVAADP LLWEQHPQPD RHQKDIFRAF 
FLDALASGGA LAVVDTKDLR LIGSSRYHGY SLDRREVEIG WTFLARSHWG GVYNKELKRL
MLDHAFRFVD TVIFLVGPAN LRSRRAVEKL GGVLAEPGQN RAGAPHVRYR IEAVRWWGER
EGAGGPSGVG SLG