Gene Strop_4194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4194 
Symbol 
ID5060678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4761128 
End bp4762180 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content69% 
IMG OID640476455 
ProductGTPase EngC 
Protein accessionYP_001161000 
Protein GI145596703 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.367616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTCTTC CCCACCGGGG TTCATCGGCG ACCCCACAGT CATTTCCGTC TCTCGCCGCC 
CTGGGCTGGT CACACCGATG GCAGGCAGCG CTCGCCGCGT ACGGTGCCGG CTGTCCCGGG
CGGGTCGTCC GCCACGACGG TTCAGCCGTC CTGATCAGCA CAGAAGGTGG CACCCGCCAC
TTCCCCGTAC GGTCCTCGGC GCCCGCGCTC GCGGTCGGTG ACTGGGTCGT CGTCGACGAC
GGTCGTGTCC TCGACCTGCT GCCACGGGCT TCACTGCTCC GCCGTCGCGA CCCCTCCACC
GGAGGAGGTC AACTCATCGC CGCTAACGTG GACGTGGTGG GCATTGTCTG TGGTCTGGAC
CGGCCGGTCG TCCACGGCCG GCTGCAACGC TTCACCTCGC TCGCCTGGGA CGCCGGAGCG
TCACCGTTGG TGATCCTCTC CAAAGCTGAC CTCGTGAACT CCACCGCCAA CATCGAAAAC
AGTCTGCTCC AGCAGCATCC GGGCGTCGAC ATCGTCTCCG TCGCGGCGAC GACAGCCACC
GGGGTATTCG ACCTCCTCGG CCGGTGCGCG AAGCGCACAC TGGTGCTCGT CGGTGAATCC
GGGGCAGGAA AGTCGACGCT CCTGAACGCC CTCGCCGGTC GGGAACTGGG CGCCACCGGA
AAGGTTCGCC GCTCGGACGC GAAGGGCCGG CACACCACCA CTGCCCGGCA GCTCTTCGCA
CTGGAGGGCG ACTGCTGTCT GATCGACACC CCCGGCATGC GTGAGGTCGG CGTCCACGCC
GACGTTGCCA CCGTTGATGC GGGGTTCGAC GACATCGCGG AGTTGGCGGT CGGCTGTCGA
TTCAGCGACT GCGGCCATGC CAACGAGCCC GGCTGTGAGG TGCTGGCGGC GGTCGCCGAC
GGGAGACTGA GCGAGCAGCG AGTGCGAGCC TGGAATCAGC TGTGCCGGGA GGCCGCGTGG
GCAGAGCTCC GCGCGGACCC CGCGGCCCAG CGCCGTGCCG GCCGGAGACT TGCCCGTGTC
ATCAAGGACG CCCAGCGTGC GAAGCGGCGC TGA
 
Protein sequence
MSLPHRGSSA TPQSFPSLAA LGWSHRWQAA LAAYGAGCPG RVVRHDGSAV LISTEGGTRH 
FPVRSSAPAL AVGDWVVVDD GRVLDLLPRA SLLRRRDPST GGGQLIAANV DVVGIVCGLD
RPVVHGRLQR FTSLAWDAGA SPLVILSKAD LVNSTANIEN SLLQQHPGVD IVSVAATTAT
GVFDLLGRCA KRTLVLVGES GAGKSTLLNA LAGRELGATG KVRRSDAKGR HTTTARQLFA
LEGDCCLIDT PGMREVGVHA DVATVDAGFD DIAELAVGCR FSDCGHANEP GCEVLAAVAD
GRLSEQRVRA WNQLCREAAW AELRADPAAQ RRAGRRLARV IKDAQRAKRR