| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4193 |
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| Symbol | |
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| ID | 5060677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4760069 |
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| End bp | 4760632 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476454 |
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| Product | PfpI family intracellular peptidase |
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| Protein accession | YP_001160999 |
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| Protein GI | 145596702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.497147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCAA AGCTCGACGG CAAGCGTGTA GCGATTCTCG CGACTGACGG CGTAGAAGAG
GTGGAGTACA CCAAGCCGCG CGCAGCTGTG GAGGCCGCCG GCGGTACCGC CGAACTGATC
TCGTTGGGCA AGGAGCCGAT TCGGTCGGTC AACCATCTGG ACACGTCCAC GACGTACGAG
GTAGACCGCG CCGTCGCCGA TGCGGACCCC GTCGACTATG ACGCCCTGGT TCTGCCCGGT
GGGGTGGCCA ACCCGGACTT CCTACGGGCC GACGCCAACG TGGTGCGCTT CGTACGGACC
TTCGTCGAAT CCGGCAAGCC GGTAGCTGCC ATCTGTCACG GTCCGTGGAC GTTGGTCGAG
GCGAACGTGG TGCGGGGCCG CACCCTCACC TCTTGGCCGA GCTTGCGCAC CGACTTGGTC
AACGCAGGCG CTACCTGGGT GGACCAGGAG GTCTTCGTCG ACAATGGGCT GATCACCAGC
CGCAGGCCCC GTGATCTGCC GGCGTTCTGC GCCACGTTGA TCAGCGAAAT AGCCGACGGT
GGGACTACCG GTTCGACCAC GTAG
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| Protein sequence | MAAKLDGKRV AILATDGVEE VEYTKPRAAV EAAGGTAELI SLGKEPIRSV NHLDTSTTYE
VDRAVADADP VDYDALVLPG GVANPDFLRA DANVVRFVRT FVESGKPVAA ICHGPWTLVE
ANVVRGRTLT SWPSLRTDLV NAGATWVDQE VFVDNGLITS RRPRDLPAFC ATLISEIADG
GTTGSTT
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