| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4106 |
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| Symbol | |
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| ID | 5060588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4670398 |
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| End bp | 4671348 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476367 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_001160914 |
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| Protein GI | 145596617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.14297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTG TGTCTATCGA CGACATCCGG AGCGCGGCCG CCGACATCAC CGGCCACGTC
CTACGTACCC CGCTGATGCG GGCCCCATGG GATGCGGACC TGTGGCTCAA GGCGGAGAGC
CTGCAGCCGG TCGGGTCCTT CAAGCTGCGC GGGGCGACCC ACGCGGTGGC CCGGCTCACA
GCGGCGCAGC GGTCGGGTGG TGTGGTCACC CACTCCTCGG GCAACCACGG CCTGGCGTTG
GCGCACGCGG CTACTGCCGC CGGCGTGCCG TGCCGGGTCG TCGTCCCCGC GGGGGCGCCG
ACGGCCAAGG TCGATCGGAT TCGGGCCTTC GGCGTGGAGG TGATGACGGT GCCGCCGCCG
CGCCGTGGCC CGGCGGCGCA GCAGCTCGCG ACGGAGACCG GCGCGGTGTT GGTGCCGCCC
TTCGACGACC GGCGGATCAT CGCTGGCCAG GGAACCATCG GTCTGGAGAT CGTGGCGGAC
CTGCCCGATG TCGATGTGGT GCTGGTGCCG GTTGGCGGGG GCGGGTTGTC CTCCGGCGTC
GCGACCGCGG TGCGGGCGCT TCGGCCGGCG GCGGCGGTCA TCGGCGTGGA GCCGGAGTGG
GCCGCCGACG CCCGGGACTC GCTGGCGGCG GGGTCGGTGG TGTCGTGGGG CGAGGAGCGC
ACCTACCGGA CCTGCGCAGA CGGACTGCGC CTGCCGCCGT CCGAGCTGAC CCTTGCGCAC
CTGCTGGAGC GGCTGGACGG GATCGTGACC GTCACGGAGG ACGAGATCCA GGCGGCGCTG
AGCCGGCTGG TCCGCGACGC GCGGCTCGTC GTGGAGCCGA GCGCCGCGGT GTCGGTCGCC
GCCCGGCTGT TCCGCCGCGC CGAGCTACCC GCCGGGCGTA CGGCCGCCGT GGTGACTGGT
GGCAACGTGG ATCCGGCCGT ACTGGCCGCT GCCCTCGCCG ACCCTTCCTG A
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| Protein sequence | MELVSIDDIR SAAADITGHV LRTPLMRAPW DADLWLKAES LQPVGSFKLR GATHAVARLT
AAQRSGGVVT HSSGNHGLAL AHAATAAGVP CRVVVPAGAP TAKVDRIRAF GVEVMTVPPP
RRGPAAQQLA TETGAVLVPP FDDRRIIAGQ GTIGLEIVAD LPDVDVVLVP VGGGGLSSGV
ATAVRALRPA AAVIGVEPEW AADARDSLAA GSVVSWGEER TYRTCADGLR LPPSELTLAH
LLERLDGIVT VTEDEIQAAL SRLVRDARLV VEPSAAVSVA ARLFRRAELP AGRTAAVVTG
GNVDPAVLAA ALADPS
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