Gene Strop_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4001 
Symbol 
ID5060482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4552045 
End bp4553184 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID640476261 
Producthypothetical protein 
Protein accessionYP_001160809 
Protein GI145596512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTATC CGGCTAGTCT CGGCACCCGC ACCATCGCCG GTGTCATCCT GACCGCCGAC 
GGTGCCCCCG CTGCCGGCAC GATCCGGCTG ACCCGGGCCA TCCCCCTGCA AGGCCCCGCC
GACGATGTGA CGATCCAGCC CGGCGCGCAC ACGGCCACCC TTGACGCCGG CGGCGCGTAC
ACACTCGACG TGCCCGTCTC GGACGATGTC GACTGGTCGC CGTCCGGGTG GGCGTACACC
CTCGACGTGG ACACCACCGC CTGGCGGTAC CGGGCGGACA TCGCGATCCC CGCCGGCCCG
CCCGCGAGTC TCGCCGACCT GGTGCCGACG ACCTCCACGG CACCGGATCC GGCGAGTACC
TACGTCACCA AAGCGTCGGT CGGCACCGCC ACCGGCCCGG CCGGGCCCCT CGACGGCAGT
GCGCTGCTGC CCGCCGGGCA GGTGCCTGAC CTGTCCGGCA CCTACACGCC CCGCGCCTAC
GTGGGCGCGT CCACCGCACT TACCGCCCCG CTGCTGTCGG CCCGTTTCAA CGACGTCCCC
GGCGGCAGCG CCGTCAACCT CGCCGAGGCG CACATCACCA TCGGCGGTCA GCTCAAACTC
GCCACGTGGT TCAACGAGGC CCTGCGCTAT CGGGCTGAGC AGCAGCCGGG CGGGTTCGGC
TACGACCACC TGATCACCCT GATCGGCTCC TACGCTGCGG CCACCGGGGC GCTGATTCGG
TTCGAGCGCC GCGACGGCGC CGACCTGCGT GTCACCACCG GGGGGATCGA CCAGGACGGG
CGACTCCAAA CCAGCCTGTA CGCGTGGCAG GACATCACCG CCGTCGACCC CGACGCGACC
GGCCGGTACA GCATGGACAC CAGTACCGGC GTCGCACCCC TGGCCGTGCG CCAGGAGAGC
GACGACCGGA CCTGGCTACG GGGCAGGATC GCCGTCACCT CCAGTGGCAC CAGCTGGGGA
CATGTCGTGG CGGCCCTGCC CACCGGCCAC GCACCCACCC ACCGCCAGCT GCTGTCGGTG
CCCACCACCG GCGGTATCGC CGCCCCCTGC GAGATCATGA CCACCGGTGA CATCGTGGTA
CGCCGCACCC AGTCCGGCGC GACCGCGTTG AGTCTCGACG GTCTCAGTTA CGTGCGATGA
 
Protein sequence
MTYPASLGTR TIAGVILTAD GAPAAGTIRL TRAIPLQGPA DDVTIQPGAH TATLDAGGAY 
TLDVPVSDDV DWSPSGWAYT LDVDTTAWRY RADIAIPAGP PASLADLVPT TSTAPDPAST
YVTKASVGTA TGPAGPLDGS ALLPAGQVPD LSGTYTPRAY VGASTALTAP LLSARFNDVP
GGSAVNLAEA HITIGGQLKL ATWFNEALRY RAEQQPGGFG YDHLITLIGS YAAATGALIR
FERRDGADLR VTTGGIDQDG RLQTSLYAWQ DITAVDPDAT GRYSMDTSTG VAPLAVRQES
DDRTWLRGRI AVTSSGTSWG HVVAALPTGH APTHRQLLSV PTTGGIAAPC EIMTTGDIVV
RRTQSGATAL SLDGLSYVR