| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3999 |
|---|
| Symbol | |
|---|
| ID | 5060480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4550550 |
|---|
| End bp | 4551134 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640476259 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160807 |
|---|
| Protein GI | 145596510 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTATCGCTG GTCTGGCCCT GTCCACCGGT
GTCGTCGCCG GCCCCCTGGC CACCCTCACC GACAGCACCC CGGCCTCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCAAG
CAGTCACGCA TCACTCTCGG TGATGAGCAG ACCGGGAACG TGAAGGCCAT CATCGAGGCC
ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCTAC CAGCTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCCTC CTCCGGCTGG GGCACGGTCG AGCAGATCAC CGACCCCGCC
TACTCCACCA CCGCGTTCCT CAACGGGCTC AAGCAGGTTG AGGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCCGACCT CGTGGCCGAG CACTGGACCA GCTGA
|
|---|
| Protein sequence | MNTILRRSVL GIAGLALSTG VVAGPLATLT DSTPASASAA AVQVAKPDLD TLIPHGTQGK
QSRITLGDEQ TGNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLNGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS
|
|---|
| |