| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3977 |
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| Symbol | |
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| ID | 5060458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4529323 |
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| End bp | 4530453 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476237 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001160785 |
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| Protein GI | 145596488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.67849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCCC CGCACCTGCT CGGCCCCACC GCAGAGCGCG TACCCGAGGT GGAGCGGATC
GCCGTGCTGC GGGCCAACGC GCTCGGGGAC TTCATCTTCG TCCTGCCGAC GCTGGCCGCG
TTGCGGGCCG CGTACCCCGC CGCGGAGATA GTCCTGCTCG GCGCGCCGTG GCACGCGAAG
CTCTGGCGCG ACCGGCCGGG TCCGGTGGAC CGGGTCCTGG TGGTTCCGCC GGCTCCCGGA
ATCCGTCACC CGGAGCCGGA CGAGCCGGAG TCCGGGTTGG CGGACTTCCT CGCCCGGGCC
CGCACGGAAC GCTTCGACCT GGCGTTGCAG GTGCACGGCG GTGGGGCCAA CTCCAACCCG
GTCGTGGCCG GTCTCGGGGC CCGGGTGACG GCAGGTCTGC GGGCAGAGGA CGCACCGCCG
CTGGACCGCT GGCTGCGATA CGTCTACTAC CAGCACGAGG TGATCCGCTA CCTGGAGGTG
GCGGCCCTGG TGGGGGCACC GGCGACCACG GTTGTCCCCG CCCTGGCGGT CACCGACGCC
GACCGGGCCG AGGCGGCCGA GGTGCTCGGC CCGGCGGACC GGCCCCGGGT GGCGCTGCAC
CCGGGTGCCA CCGACACCCG TCGACGCTGG CCGGTCGAGC ACTTCGCGGC CGTCGCCCGG
CAGCTGCACG GGGACGGGTA CGAGGTGCTG GTCACCGGCA CCCCGGTGGA ACAGGAGGTG
GTGGACCGGG TGGTGGCGGC GGCCGGGGTG CCGCTGCGGC CGGAGGTCGG CACGCTCAGC
CTCGGCGGGT TGGCCGGCTG CTACGCCGGC TGCGCGCTGG TGGTCGCCAA CGACACCGGG
CCGCTGCACC TGGCGGCGGC GGTCGGCACT CCCACGGTCG GCATCTTCTG GGTCGGCAAC
CTGATCACCA CGGCGAGCCC GCTGCGGGGC CGGCACCGCC CGATCACGTC CTGGACGGTG
CACTGTCCGG TCTGCGAGGT CGACTGCACC CCGGGTAGCT ACCCACACCG GCCCGGCGAT
GGCGAATGCC CACACCGCGA CTCGTTCGTG GCCGAGGTCC CGGTGATCGA GGTCCTCGAA
GCCGCCCGCG ACCTGCTCGC CGACGGAGAA CAGCCGGCCT CGACGCTTTG A
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| Protein sequence | MVAPHLLGPT AERVPEVERI AVLRANALGD FIFVLPTLAA LRAAYPAAEI VLLGAPWHAK
LWRDRPGPVD RVLVVPPAPG IRHPEPDEPE SGLADFLARA RTERFDLALQ VHGGGANSNP
VVAGLGARVT AGLRAEDAPP LDRWLRYVYY QHEVIRYLEV AALVGAPATT VVPALAVTDA
DRAEAAEVLG PADRPRVALH PGATDTRRRW PVEHFAAVAR QLHGDGYEVL VTGTPVEQEV
VDRVVAAAGV PLRPEVGTLS LGGLAGCYAG CALVVANDTG PLHLAAAVGT PTVGIFWVGN
LITTASPLRG RHRPITSWTV HCPVCEVDCT PGSYPHRPGD GECPHRDSFV AEVPVIEVLE
AARDLLADGE QPASTL
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