Gene Strop_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3974 
Symbol 
ID5060455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4526184 
End bp4526693 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640476234 
ProductNUDIX hydrolase 
Protein accessionYP_001160782 
Protein GI145596485 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAGAT TATCCGGGGT GAGCATTTCC TGGGCAGATT CCTACGTCGG GCAGCTACGC 
GCCCTCGCCG GCGACCGGAC GCTGATGTTC GTCGGTGCCC GCGCGGTGGT GCGGGACAAC
GCAAGCCGGA TCCTGCTGAT CCAGCGCGCC GACAACGGGC ACTGGGCCAT GCCGGCGGGG
GCGATGGAGT TGGGTGAGTC GATCGCCGAC TGCGCGGTGC GGGAGGTCCG GGAGGAGACC
GGGCTGCGCG CCCTGCGGGT CAGCGCCTTC GCCCTCTACA CCGGGCCGGA CCGCACCCAC
ACCAACATGT ACGGGCACAC GTACCAGATC TTCACCGCCG CGTTCCGGGT GGAGGAGTGG
GACGGAGACG TGGTCCGGAT GACCGACGAG ACCACCGATG CCGCCTTCTT CGACCGCGGC
CACCTGCCCA GCCCGCTGTC GGCCAGCGTC CCGGAGACCC TCGCCGACCT GGATGTCTTC
GAACAGACAA ACCGCCTGAT CCTCAAGTAG
 
Protein sequence
MRRLSGVSIS WADSYVGQLR ALAGDRTLMF VGARAVVRDN ASRILLIQRA DNGHWAMPAG 
AMELGESIAD CAVREVREET GLRALRVSAF ALYTGPDRTH TNMYGHTYQI FTAAFRVEEW
DGDVVRMTDE TTDAAFFDRG HLPSPLSASV PETLADLDVF EQTNRLILK