Gene Strop_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3941 
Symbol 
ID5060420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4493960 
End bp4494430 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID640476199 
Producthypothetical protein 
Protein accessionYP_001160749 
Protein GI145596452 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTGCG TGTATTTTCG CGGCATGTCC CTGGACCCCT CCTTCGTCGG CCGGACCTAT 
CCGCCGACCG CCCCCTATCA GGTGGGCCGA GAGAAGATTC GTGAGTTCGC GACCGCGATC
GGCGCTACCG AACCGGCCCA CCACGATCCG ACTGCCGCTC GCGCGCTCGG CCATCCGGAC
GTGGTCGCCC CGCCGACGTT TCCGGTCCTG GTCACCATGG CCGCCACCCG CCAGATCGTT
GAGGATCCGG ACCTCGGTGT CGACTACAGC CGGGTGGTTC ACGGCGATCA GCGCTTTGCC
TACACCCGCC CGGTCGTGGC GGGGGACGAG CTGGTCTGCG TCAACACCAT CGAGGATGTC
AGCACCCGCG GCGGTCACGG GTTCCTGACC ACCCGCACCG AGGTCACCAC GCCCGACGGT
GAGTCGGTGG TCACCGTCTG GTCGAAGATC GTCGTACGGG GGGAGGGCTG A
 
Protein sequence
MFCVYFRGMS LDPSFVGRTY PPTAPYQVGR EKIREFATAI GATEPAHHDP TAARALGHPD 
VVAPPTFPVL VTMAATRQIV EDPDLGVDYS RVVHGDQRFA YTRPVVAGDE LVCVNTIEDV
STRGGHGFLT TRTEVTTPDG ESVVTVWSKI VVRGEG