| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3884 |
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| Symbol | |
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| ID | 5060362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4447919 |
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| End bp | 4448707 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640476141 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001160692 |
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| Protein GI | 145596395 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCGA GTACCGTCCT CACCATCGCT GGCTCGGACT CCGGTGGGGG CGCCGGCATT
CAGGCCGACC TGAAGGTCTT CGCCGCGCTG GAGGCGTACG GCACCAGCGT TGTCACCGCC
GTCACCGCGC AGAACACCCG CGGCGTTGAC GCCGTCCTGC CGCTGCCCCC GCAGACCGTG
ACCGACCAAC TGGAGAGCGT GCTCGCCGAC TTCTCGGTGC GGGCGGTGAA GACCGGCATG
CTCGGTAGCC CAGCCGTCGC CGAGGTGGTC GCTGTCGCGG CGAGGGACGG CCGCCTACCT
CACCTCGTCG TTGACCCGGT GCTGGTGGCC ACCAGCGGGC ACCGGCTGGG CGCGGTCGCG
GCGGTGGAGC GGCTGCTGCC GTTCGCTCAG GTGGCGACGC CGAACCGGGC GGAGGCCGCG
GCCCTCACCG GAGGCCGGGT TGACACGGTC GAGGAGATGG TCGCCGCCGC GACGGCACTC
ACCGCCGGCG GACCCGAGTA TGTCGTGGTC ACCGGTGGTG ACGGGGACGC TGGCGAACCG
GCGGTCGACG TGCTCCACGG CGAGGGTGGC ACCACCCTGC TCCGCGCTTC TCGGGTGCCG
ACCCGGCACA ACCACGGGAC AGGGTGCTCG TTCTCGGCGG CCGTCGCCGT CCGGCTCGCC
CGCGGTGATG CGGTGCCGGT GGCGGTCGCG GCCGCCAAGG AGTACGTGAC CCGGGCGCTG
ATCGGCGCTC GGGACTGGGA GTTGGGCGCG GGACCCGGGC CGCTCGATCA CTTCAGCTGG
TCCGTCTGA
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| Protein sequence | MTPSTVLTIA GSDSGGGAGI QADLKVFAAL EAYGTSVVTA VTAQNTRGVD AVLPLPPQTV
TDQLESVLAD FSVRAVKTGM LGSPAVAEVV AVAARDGRLP HLVVDPVLVA TSGHRLGAVA
AVERLLPFAQ VATPNRAEAA ALTGGRVDTV EEMVAAATAL TAGGPEYVVV TGGDGDAGEP
AVDVLHGEGG TTLLRASRVP TRHNHGTGCS FSAAVAVRLA RGDAVPVAVA AAKEYVTRAL
IGARDWELGA GPGPLDHFSW SV
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