Gene Strop_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3855 
Symbol 
ID5060333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4413743 
End bp4414252 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content72% 
IMG OID640476112 
Producthypothetical protein 
Protein accessionYP_001160663 
Protein GI145596366 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.955874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCAG GGGGACCGAT CCGTTTCACG CTGCCAACCG TCGCCGACAC GCACGCCTTC 
GGCCGCCGGC TGGCCGGCCT CCTACAGGCG GGGGACCTCC TGCTGCTGAC CGGTCCCCTC
GGGGCCGGCA AGACGGCTCT CACCCAGGGC ATCGGCGCCG GGCTGGGGGT GACTGGGGCG
GTCACCTCAC CCACCTTCGT GATCGCGCGA GTACACCAGC CCGATCCGGC CCGGGGCGGT
TCGGTGGCCC TCGTGCACGC CGACGCGTAC CGCCTGGGCG ATGCGACCGA TCCCCGCGCC
GAGATCGACG ACCTGGACCT GGACGCGTCG GTGGACGAGG CGGTGACCGT GGTCGAGTGG
GGCGAAGGGC TCGCCGAGCA GCTCGTCGCG GCGCACCTGT GGGTCCGGAT CGACCGCCGG
GAGGACGACA CCCGGTTGGT CGACCTGGAA CCCGTCGGTG GCGACTGGAG GGCGCGGTTG
ACTGGTACCC CCGGATTCAT CGACAGCTGA
 
Protein sequence
MNPGGPIRFT LPTVADTHAF GRRLAGLLQA GDLLLLTGPL GAGKTALTQG IGAGLGVTGA 
VTSPTFVIAR VHQPDPARGG SVALVHADAY RLGDATDPRA EIDDLDLDAS VDEAVTVVEW
GEGLAEQLVA AHLWVRIDRR EDDTRLVDLE PVGGDWRARL TGTPGFIDS