Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3828 |
Symbol | |
ID | 5060306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4385255 |
End bp | 4386508 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476086 |
Product | phosphatidylserine decarboxylase related protein |
Protein accession | YP_001160637 |
Protein GI | 145596340 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.458299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT CCCCCGCCGT GCTTCCCACC GGCCGGTCCG GTCCGGTCCG CATCGGCGAG CGCGCCGCCC GTGTCCTCGT CTCGGAACTC GCCCGAATCA ACGAGCCGAA GGCGGCCCTG CTGGTTGACG CCAGCCCGGA GTCCCTGGTG CTCGTCGCGG CGATCGAGGC GCTGTTGCCC GGTGACACGC TCACCGTCGT ACCGGCCGTG GCGTCGGACG CCGGGATGCT GCGCGAGCAC GTAGCCGCCC AGGGTCCCTG GGTCGCCGAG CGGGTCCGGG TCGTTGACGC GCTGGCCGAC GCCGAGGCGG CGGCGGTGGC GATCATCGGT GAACCGCTCA CCGGGACGGT GGAGGAGACC CGTGCCACCC TCGACGGGCT CGGTAGGCAC CTCGACACCG GAGCCGTGTT GAGCGTCGCC ACACCCGCCA CCCCCAAGCG CACCGGCGGC GCGGCCGACG AACTGGACCG CCAGGCCGCG CTGCACGGCG TCGGTAGCGA CCTGCTGCTG CGCAACAACC CACCGCTGCG AGTGCACCGA CTCCGTTTCC GCCCGGCCAG CGCGGCGGCG GCGGTGGGGA TGGCGCCGGC GTACCGGCCC TCCAGCGTGC CGCTGACCCG CACGATGCAC ATCGACAGCA ACGGGGTGGC TGCCGCCGGA ATCGCCCTCG GGCTGGCGGC GGTGGCCCGC GTCGCCCGGC CGACGTCGAA GCTGTGGCTG TTGCCGGCCC TCGCCACCGC ACCGGTCGCC GCCTTCTTCC GGGACCCGGA GCGGGAGGTG CCAGCGGATC CGTCCGCGGT GGTGGCCTCG GCCGACGGCA AGGTGCTCTC CGTACAACGG CTCTCCGACG AACGGTTCGG CGAGGGCGAG TGGCTACGGA TCGCGGTATT CCTGTCGGTG CTCGACGTCC ACATCAACCG CTCCCCGGTG CCGGGCAAGG TGGTCGACTA CTTCGTGACC GACGGCGGCT TCGCCAACGC GATGAAGCCT GATGCGGAAC ACAACGTCGC CGCGTACACC GTGTTGGACA CCACGAACGG AACGGTGATC GTGGCGCAAC GTACCGGATT GATCGCCCGG CGGATCGTGC AGCGGGCGCC CATCGGGTCG CTGCTCGCCA AGGGCGAGCG GTTCGGGCTG ATCAGGTTCG GCTCACGCAC CGACGTCTAC CTGCCGGCCG ATGCGGCGCA GCCGCTGGTC GGGCCCGGCG ATCGGGTCGT GGGTGGATCG TCGGTAATCG CCCGCTGGCA CTGA
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Protein sequence | MTQSPAVLPT GRSGPVRIGE RAARVLVSEL ARINEPKAAL LVDASPESLV LVAAIEALLP GDTLTVVPAV ASDAGMLREH VAAQGPWVAE RVRVVDALAD AEAAAVAIIG EPLTGTVEET RATLDGLGRH LDTGAVLSVA TPATPKRTGG AADELDRQAA LHGVGSDLLL RNNPPLRVHR LRFRPASAAA AVGMAPAYRP SSVPLTRTMH IDSNGVAAAG IALGLAAVAR VARPTSKLWL LPALATAPVA AFFRDPEREV PADPSAVVAS ADGKVLSVQR LSDERFGEGE WLRIAVFLSV LDVHINRSPV PGKVVDYFVT DGGFANAMKP DAEHNVAAYT VLDTTNGTVI VAQRTGLIAR RIVQRAPIGS LLAKGERFGL IRFGSRTDVY LPADAAQPLV GPGDRVVGGS SVIARWH
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