Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3822 |
Symbol | |
ID | 5060300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4378364 |
End bp | 4379374 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640476080 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001160631 |
Protein GI | 145596334 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.922354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGCT ACGTCATTCG ACGGTTGCTC CAGTTCATCC CGACCGTGCT GGGCACCATG TTCCTGCTCC ACTACATGAC CTCGCTGGCG ATTCAGTTCA GCGGGAACCC GGTCCGAGCC ATCTTCGGTG ACCGGACCCC GCCGCCGGCC CTACTCCAGG CGGTCACCGA CCGACTCGGC TACGGTGACC CCTGCCTCGA GCAGAAGGGC AACCCCTGCT TCGGGCTCTT CCTCGACCGG GTGAGCGGAG TCTTCCTGCA CTTCGACTTC GGCATCGACC TGCGGCGGCA GGAGGTCACC GACCTGGTGG CCAATGCCGT TCCATTCACC CTGAAGCTGC TGGTGATCGC GATTGTCTTC GAGGCCGTCG TCGGTATCGC CGCCGGTGTG TGGGCGGGTC TGCGGGGCGG CAGCTTCGCG GACAACCTTG TCAAGATCAG CACCGTCTTC GTGATCTCTG TGCCGATCTT CGTGCTCGGT ATCGTGGTGC GGGAGTTCAT CGGGGTCAAG TTCGGCAACA TCCTGCGTGA TCAGGAGTGG ATCCCCGACG TCGTCGCGTA CGGGTTCTTC AGCCCCGGCT TCAAGCCGGA CTACCCGTTC GCCAGTCTCC TGATCCCCGG CATGGTGCTC GGCGCGGTGG CGCTCGCCAC CACCGCGCGT CTGACCCGGA CCAGCATCAT GGAGAACATC CGGGCGGACT ACGTCCGGAC CGCACGGGCG AAGGGCCTGG CGAACAAGCG GGTCATCGGC GTGCACACGC TGCGTAACTC GCTGATTCCG GTGATCACGT ACCTCGGCGT CGACATCGGT TCGGCGATGG CGGGCGCGGT GGTCACCGAG ACCATCTTCA ACGTGCCCGG TATCGGCCGA CTGGTGACGA GTGCCGCCCG GGATGGAGAG TCGTCCGTGG TCATCGGCGT GGTGACCATG CTGGTGTTGG TCGTTCTGCT CGCCAACCTG TTGGTCGACC TCCTGTACGC CGTCCTCGAC CCGAGGATCC GCTATGAGTG A
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Protein sequence | MGRYVIRRLL QFIPTVLGTM FLLHYMTSLA IQFSGNPVRA IFGDRTPPPA LLQAVTDRLG YGDPCLEQKG NPCFGLFLDR VSGVFLHFDF GIDLRRQEVT DLVANAVPFT LKLLVIAIVF EAVVGIAAGV WAGLRGGSFA DNLVKISTVF VISVPIFVLG IVVREFIGVK FGNILRDQEW IPDVVAYGFF SPGFKPDYPF ASLLIPGMVL GAVALATTAR LTRTSIMENI RADYVRTARA KGLANKRVIG VHTLRNSLIP VITYLGVDIG SAMAGAVVTE TIFNVPGIGR LVTSAARDGE SSVVIGVVTM LVLVVLLANL LVDLLYAVLD PRIRYE
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