Gene Strop_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3810 
Symbol 
ID5060288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4365158 
End bp4366426 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content75% 
IMG OID640476068 
Producthypothetical protein 
Protein accessionYP_001160619 
Protein GI145596322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTG TCACCCCCGA TCAGCCCGGC CGACGCGCTC GGGTGGGCGC CCGCCCGCCG 
GGCCGACCCG GGCCAGCCCG CCGCATACCC GCGCCACGGG CGGGTGGGCC GCCGAGTCGT
CCGCCGCTGG CCGTCGCCGC GGGCGTCGCC GCAGTCGGTG CGGCGCTCAC CTCCTGGCTG
CCGGTGGCAG TGGTGCTCTG GTTCTTCCAG CTCAGTGAGG GTGCGTCGAG CCTGCCGGAC
GCGGTCCGGG TCGGGTTGGC TGGCTGGTTG CTCGGACACG GCATCCCCCT GACGACGAGT
GCCGGTCCGC TCGGGCTCGC CCCGCTGGCG GTAACCCTGC TCGCCGGCTG GCGGCTCAAT
CGGGCCGGAG TGCACGTCAC CCGAGCTATC GGTGCCCGGG GCAGCAGGTC GCCACGACGC
GCGATCGTCG CCGCGGGGGC GGTCGGGGTC GTGTACACGA TCCTCGGGGT GCTCGCCGCT
CTGCTGGTCA CCGGTGCGGA ACTGGACGTG TCGCCGGTAC GGTCCGGCCT GACTCTCGCC
GTGGTCGCCA CGGTCGCTGC CCTGATCGGT ACGGTGCGCA CGACCGGGCT CGGTGACCTG
CTCGCCGCGC GAGCGTCGCT GCCGCTGCGG GAGGGGGTTC GGACCGGTCT GGTCGCGGCG
CTCCTGCTGC TCGCGGCGGG GGCCGGCGCG GCGGGGCTGG CGGTGGCGAC CGGCGGCGGC
GACGCGGCCG ACCTGATCGC GGCCTACCGC ACCGGGGTGG CCGGGCAGGC CGGGATCACC
CTGGTCAACC TGGCGTACGC CCCGAACGTG GCGATCTGGT CGGCCAGCTA CCTGCTCGGT
CCCGGGTTCG CGGTTGGCAC CGACACCACG GTGCAGACCA GCGAGGTAAC AGTTGGGGCG
TTGCCGGCCC TGCCGCTGGT CGCGGGCCTC CCCGGTGGAC CGGTGGACGG CCTGGGGACG
GGTCTGCTCG CGGTGCCGAT TCTGGTCGGG ATGGTGGCGG GTTGGTCGTT GACCCGTCGG
CTGCTGCTCT CCGGCAGCGA CCGAGCCCGG GAAGAGTGGG GGCCGCTCCT GCGCCCGGCG
GCGTTCGCCG GGCCGGTGAC GGGGCTACTG GTGGGGATCG CGGCGGCGGC GTCAGCCGGT
CCACTGGGCG CGGGCCGGCT GGCTGAGGTC GGACCGGTGC CGTGGCAGGT GGCGGCGGTG
GCGACTGTGG TGACCGGTAC CGGTGTGCTG GGTGGGGTGG TAGCGGCCCG CTTCCTGTCC
CGCGGCTGA
 
Protein sequence
MSSVTPDQPG RRARVGARPP GRPGPARRIP APRAGGPPSR PPLAVAAGVA AVGAALTSWL 
PVAVVLWFFQ LSEGASSLPD AVRVGLAGWL LGHGIPLTTS AGPLGLAPLA VTLLAGWRLN
RAGVHVTRAI GARGSRSPRR AIVAAGAVGV VYTILGVLAA LLVTGAELDV SPVRSGLTLA
VVATVAALIG TVRTTGLGDL LAARASLPLR EGVRTGLVAA LLLLAAGAGA AGLAVATGGG
DAADLIAAYR TGVAGQAGIT LVNLAYAPNV AIWSASYLLG PGFAVGTDTT VQTSEVTVGA
LPALPLVAGL PGGPVDGLGT GLLAVPILVG MVAGWSLTRR LLLSGSDRAR EEWGPLLRPA
AFAGPVTGLL VGIAAAASAG PLGAGRLAEV GPVPWQVAAV ATVVTGTGVL GGVVAARFLS
RG