Gene Strop_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3796 
Symbol 
ID5060274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4350727 
End bp4352328 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content66% 
IMG OID640476054 
Product4-phytase 
Protein accessionYP_001160605 
Protein GI145596308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.207613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTC GTAGACTCGC CGCCTGGACA GCCCTCCCGC TCGCGGTGAC CCTGGGCCTG 
GTGGCCTGCG GCTCCGGCGG CGGCGGGTCC GGCGGGACCG ACCCCAACGC GGCCGTGCGA
ATCGAGATCG CCGAGCCGCA GCACCTGGTG CCGACCAACA CCAATGAGAC GAGCGGCTCG
CAGGTGCTCG CCGCCCTGTT CAGCCCGCTG ATCGGCTACG ACGACGCCAG CCAGGCGTAC
GAGGTGGCAG CCGAGTCGGT GACGTCCGAG GACAACATCA CCTGGACGAT CAAGCTCAAG
GACGGCTACA CCTTCCACAA CGGCGAGCCG GTCACCGCCG ACAACTACAT CGACGCCTGG
AACTACGGCG CCTATGCACC GAACGGCCAG GGCGCGAGCT ACTTCTTCGA GAAGATCGCT
GGGTACGAGG ACCTCCAGGG CGAGACCCCG GCGGCGCAGA CGCTGTCCGG CCTGGAGAAG
GTCGACGACC TGACCTTCAC CGTGACCCTG TCCGCGCCAT ACTCCGACTT CCGGACCATG
CTCGGGTACA ACGCCTTCTA CCCGCTGCCG AAGGCCGCCT TCTCCGAGCC GGGCGTGCTC
GACGAGGGTT ACGAGAAGGC GCCGATCGGT CAGGGTCCGT TCAAGATGAA GGGCACCTGG
CAGCACGACG CCCGGGTCGA GGTCGAGCGG TACGACGCCT TCCCCGGCGA GCAGCCGAAG
GTGGCGGGTG TCGAGTTCCG GATCTACCAG CAGCCCGCCG CCGCGTACGC GGATGTCCTC
TCGGACAACC TCGACGTGAT CAAGGTGATC CCGACCGAGA GCCTGTCGAC GGCCCCCACC
GATCTGGGTG ACCGGTTCCA GACCAGCCCC GGGTCGTCCT TCCAGTTCCT CTCCTTCCCG
ACCTACCAGG AGGAGTTCAG CAACCCGGAC GTGCGTAAGG CGATCTCGAT GGCGATCGAC
CGCGAGGAGA TCACGACGGC GATCTTCAAG GACTCGCAGA CGCCGGCCCG CTCGTTCATC
TCTCCGGTTG TCGCGGGCTA CCGCGAGAAC ACCATCGGCG ACGCCGGCAC CTTCGACCCG
GCCAAGGCCA AGGCGCTCTA CCAGAGTGCG GGCGGGCCGA GCCAGATCGA GATCTCGTAC
AACGGCGACG GCGGCCACAA GGACTGGGTT GACGCCACCT GCAACCAGCT CAAGGCAAAC
CTGGATGTGG CGTGCGTCGG CAACGCCGAG CCGAAGTTCT CGGACCTGCT GACGAAGGTC
AAGGCGGAGC AGCCGGTCGG CCTGTTCCGG ATGGGTTGGT CCATGGACTA CCCGTCCATG
GAGAACTACC TCGGCCCGCT GTACAGCAGC ACCGGCTCGG CGAACTTCTA CGGCTACAGC
AACCCCGAGT TCGACAAGCT GGTCGCCGAG GGTTCGGCGG CGGCCACCGA GGAGGAGGCG
ATCGCGAAGT ACCAGCAGGC CGAGGAGGTG CTGGCCGAGG ACATGCCGGT GATCCCGCTG
CGCTTCGGCC AGAACGTCTT CGGGCACTCG ACCAAGGTCA CGAACGTGGA GTTGGACCTC
TTCAACCGGG TCGACCTGCT GAAGATCGAG GCAGTCCAGT AG
 
Protein sequence
MRVRRLAAWT ALPLAVTLGL VACGSGGGGS GGTDPNAAVR IEIAEPQHLV PTNTNETSGS 
QVLAALFSPL IGYDDASQAY EVAAESVTSE DNITWTIKLK DGYTFHNGEP VTADNYIDAW
NYGAYAPNGQ GASYFFEKIA GYEDLQGETP AAQTLSGLEK VDDLTFTVTL SAPYSDFRTM
LGYNAFYPLP KAAFSEPGVL DEGYEKAPIG QGPFKMKGTW QHDARVEVER YDAFPGEQPK
VAGVEFRIYQ QPAAAYADVL SDNLDVIKVI PTESLSTAPT DLGDRFQTSP GSSFQFLSFP
TYQEEFSNPD VRKAISMAID REEITTAIFK DSQTPARSFI SPVVAGYREN TIGDAGTFDP
AKAKALYQSA GGPSQIEISY NGDGGHKDWV DATCNQLKAN LDVACVGNAE PKFSDLLTKV
KAEQPVGLFR MGWSMDYPSM ENYLGPLYSS TGSANFYGYS NPEFDKLVAE GSAAATEEEA
IAKYQQAEEV LAEDMPVIPL RFGQNVFGHS TKVTNVELDL FNRVDLLKIE AVQ