Gene Strop_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3787 
Symbol 
ID5060265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4340915 
End bp4341625 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID640476045 
Producthypothetical protein 
Protein accessionYP_001160596 
Protein GI145596299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.335506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTG TTTCCTGGAT CACCGCCCGG GGGCTGTTGG GGCGGCGCCG CTTCCTGCTG 
CTCTTCCCGC TACCGGTGCT GCTGGTCCTG TTGGCGGTGC TCTCCCGCGC CCTGGGGGTC
GACCCCGGCG AGTGGGGGCC GCCGGTGCTG GTCGGCCTCG GGTTGGCCGT GGCGCTGCCG
GTGATCGCGT TGATCGTCGG GACCGGCGTG CTCGGTGCGG AGATCGAGGA CGGCACCGTG
GTGCACATCC TCACCAAGCC GCTGCCGCGT TGGCAGATCG TGCTGCCGAA GCTGGCGGTG
GCTGCCGGCG TCACCGCGGC TACCGTCGCC GTGCCGCTGT ACGTGGCCGG TGTGCTCGCC
AGTTCGGTCC GGGTCGGGCT GGCGCTCGCC GCCGCCGCCT CCGTCGGCGC GCTGGCCTAC
AGTGCGCTCT TCCTCGCGCT CAGCCTGGTC ACCCGGCGCC CGGTGCTGCT CGGGCTGGTC
TACGTGCTGA TCTGGGAGGG GCTGCTCGGC AATTTCGTCA GCGGAACGAA GGTGCTCTCC
ATCCAGCAGT ACGTGATCGC GCTCGCCGAC CGGTTCGCTC CGACCGAGCT CCTCGCCACC
GATGTGTCGG TGCCGGTCGC GGCGGTGATG AGCACGCTGA TCGTGGCCGG CTTCACCGCC
CTGGCAATTG ATCGACTTCG GTCGTTCAGT GTGGCCGGCG AGACCAGCTG A
 
Protein sequence
MSTVSWITAR GLLGRRRFLL LFPLPVLLVL LAVLSRALGV DPGEWGPPVL VGLGLAVALP 
VIALIVGTGV LGAEIEDGTV VHILTKPLPR WQIVLPKLAV AAGVTAATVA VPLYVAGVLA
SSVRVGLALA AAASVGALAY SALFLALSLV TRRPVLLGLV YVLIWEGLLG NFVSGTKVLS
IQQYVIALAD RFAPTELLAT DVSVPVAAVM STLIVAGFTA LAIDRLRSFS VAGETS