Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3787 |
Symbol | |
ID | 5060265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4340915 |
End bp | 4341625 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476045 |
Product | hypothetical protein |
Protein accession | YP_001160596 |
Protein GI | 145596299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.335506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTG TTTCCTGGAT CACCGCCCGG GGGCTGTTGG GGCGGCGCCG CTTCCTGCTG CTCTTCCCGC TACCGGTGCT GCTGGTCCTG TTGGCGGTGC TCTCCCGCGC CCTGGGGGTC GACCCCGGCG AGTGGGGGCC GCCGGTGCTG GTCGGCCTCG GGTTGGCCGT GGCGCTGCCG GTGATCGCGT TGATCGTCGG GACCGGCGTG CTCGGTGCGG AGATCGAGGA CGGCACCGTG GTGCACATCC TCACCAAGCC GCTGCCGCGT TGGCAGATCG TGCTGCCGAA GCTGGCGGTG GCTGCCGGCG TCACCGCGGC TACCGTCGCC GTGCCGCTGT ACGTGGCCGG TGTGCTCGCC AGTTCGGTCC GGGTCGGGCT GGCGCTCGCC GCCGCCGCCT CCGTCGGCGC GCTGGCCTAC AGTGCGCTCT TCCTCGCGCT CAGCCTGGTC ACCCGGCGCC CGGTGCTGCT CGGGCTGGTC TACGTGCTGA TCTGGGAGGG GCTGCTCGGC AATTTCGTCA GCGGAACGAA GGTGCTCTCC ATCCAGCAGT ACGTGATCGC GCTCGCCGAC CGGTTCGCTC CGACCGAGCT CCTCGCCACC GATGTGTCGG TGCCGGTCGC GGCGGTGATG AGCACGCTGA TCGTGGCCGG CTTCACCGCC CTGGCAATTG ATCGACTTCG GTCGTTCAGT GTGGCCGGCG AGACCAGCTG A
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Protein sequence | MSTVSWITAR GLLGRRRFLL LFPLPVLLVL LAVLSRALGV DPGEWGPPVL VGLGLAVALP VIALIVGTGV LGAEIEDGTV VHILTKPLPR WQIVLPKLAV AAGVTAATVA VPLYVAGVLA SSVRVGLALA AAASVGALAY SALFLALSLV TRRPVLLGLV YVLIWEGLLG NFVSGTKVLS IQQYVIALAD RFAPTELLAT DVSVPVAAVM STLIVAGFTA LAIDRLRSFS VAGETS
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