| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3769 |
|---|
| Symbol | |
|---|
| ID | 5060247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4321195 |
|---|
| End bp | 4322295 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640476027 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_001160578 |
|---|
| Protein GI | 145596281 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.321296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACTG AGAAGAGCCA GGCGGCCGGC ACCCCGGCCA CGAAGCGTCA GTTTCGCATC
TGGCGGGGCG ACGAGACCGG TGGCGACCTG AAGGAATACC TGGTCGAGGT GAAGGAGGGC
GAGGTCGTCC TCGACATCAT CCACCGACTT CAGAGCACGG AGGCACCGGA CCTCGCCTGC
CGCTGGAACT GCAAGGCCGG CAAGTGCGGC TCCTGCTCGG TGGAGATCAA CGGCAAACCG
AAGCTGGCCT GTATGACCAG GATGTCGACC TTCACGGAAG ACGAGACGAT CTCGGTCACA
CCGCTGCGCA CGTTCCCGAT CGTTCGAGAC CTGGTCACCG ACGTCTCGTT CAACTACGAG
AAGGCCCGGG AGACACCGGC CTTCGCGCCG CCCCCCGGTG TCGCTCCCGG CGACTACCGG
ATGCAGCAGG TTGACGTCGA GCGCTCGCAG GAGTTCCGCA AGTGCATCGA GTGCTTCCTC
TGCCAGACGG TCTGTCACGT GATCCGGGAC CACGAGGAGA ACAAGCCGGC CTTCGCCGGG
CCGCGGTACT TCATCCGGGC CGCCGAGTTG GACATGCACC CGCTGGACGC GCGGGACGAC
CGCAAGGAGT ACGCGCAGGC CGAACAGGGC CTTGGCTACT GCAACATCAC CAAGTGCTGC
ACCGAGGTCT GCCCCGAGCA CATCAAGATC ACCGATAACG GGATTATCCC CATGAAGGAG
CGGGTAGTAG ACCGGAAGTA TGATCCTCTT GTTTGGCTTG GAAACAAGAT CTTCCGGAGG
GGTCAGGTGC CTCAGACCAG CGTGACCAGC GAGCACTCCC CGGGTGCCGT GCGCACCCCC
GCGACCGGCC CGCCAGCGGT CCACTCGCAC GCGGGAGGGT CCCACGACCC GAAGGCCGAG
GCGCAGGCGC AGGCGGGCGT CAACTGGCAC CGCGAGGTGC CGAAACCGAC CGCCCCGGCG
GTTGACGAGT CCGGCAAGCT GCCGCTGACC GAGCTCACCT TCGATCGGCC GGCGGCACCG
TCGCCATTCG GCGAGGACGT GAGCTTCCCA CTGCCGCCGG AACACCTGAA CTACGCCCAC
CCGGAGCAGG ACAAGCACTG A
|
|---|
| Protein sequence | MGTEKSQAAG TPATKRQFRI WRGDETGGDL KEYLVEVKEG EVVLDIIHRL QSTEAPDLAC
RWNCKAGKCG SCSVEINGKP KLACMTRMST FTEDETISVT PLRTFPIVRD LVTDVSFNYE
KARETPAFAP PPGVAPGDYR MQQVDVERSQ EFRKCIECFL CQTVCHVIRD HEENKPAFAG
PRYFIRAAEL DMHPLDARDD RKEYAQAEQG LGYCNITKCC TEVCPEHIKI TDNGIIPMKE
RVVDRKYDPL VWLGNKIFRR GQVPQTSVTS EHSPGAVRTP ATGPPAVHSH AGGSHDPKAE
AQAQAGVNWH REVPKPTAPA VDESGKLPLT ELTFDRPAAP SPFGEDVSFP LPPEHLNYAH
PEQDKH
|
|---|
| |