| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3695 |
|---|
| Symbol | |
|---|
| ID | 5060171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4239273 |
|---|
| End bp | 4240448 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640475951 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_001160504 |
|---|
| Protein GI | 145596207 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.669073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGT CCACCGTGGA TCCCGCGGAC CCGGTCTTCC GACTGCATCG GGGCGGCAAG
CTGGCCGTCG CCTCGACCGT CCCACTGACC AGTAGGGAAG ACCTCTCCCT GGCGTACACC
CCCGGGGTGG CCCAGGTCTG CGCGGCCATC GCCGCCGACC CCCGTCTCGC CGATGACTAC
ACCTGGGCCG GGCACACCGT TGCGGTCGTC ACCGACGGCT CCGCCGTGCT GGGGCTCGGC
AATATCGGCC CGCACGCCGC GATGCCGGTC ATGGAGGGTA AGGCCGTGCT GTTCAAACAG
TTCGGCGGGG TGGACGCGGT GCCGATCTGC CTGAACACGC AAGATGTGGA CGAGATCGTG
GCAGCGGTAC GGGCCCTCGC CCCCTCCTTC GGCGGTATCA ACCTGGAGGA CATCAGCGCG
CCGCGTTGCT TCGAGGTTGA GCGGCGCCTC GACGAGGCGC TGGACATCCC GGTCTTCCAC
GACGACCAGC ACGGCACCGC GATCGTCGTG CTCGCCGCGC TTCGCAACGC GGCGGCGTTG
CTCAACCGAA AGCTCGGCGA CCTTCGGGTG GCGATCAGTG GCGCGGGTGC CGCCGGTGTG
GCGGTGACCA GGATGCTCGT CGCCGGCGGA GTGAACCCGG AACAGGTGGT GGTCTGTGAC
TCCCGGGGCA TCCTCGGGCA GCACCGCGAA GGTCTCACCG GCACCAAGGC CGAGCTGGCG
GAGCTGACCA ACGGCGACGG CCGGCGGGGC GACGTGGCCG AGGCGCTGCG CGGCGCCGAC
GTGCTGATCG GTGTCTCTGG TGGCCAGATC CCCGAGGCGG CAGTGGCCGG CATGGCTCCG
GGCGGGATCG TCTTCGCCCT GGCCAACCCC ACCCCCGAGG TGCATCCGCG GGTGGCCGCC
CAGCACGTCG CGGTGGTCGC CACCGGTCGG AGTGACCACC CCAACCAGAT CAACAACGTG
CTCGCCTTCC CCGGTGTCTT CCGCGGTGCG CTGGACGCCC GGGCCACCCG GATCACCGAT
GGCATGAAGG TGGCCGCGGC GGACGCGATC GCCGGGGTGG TGGCCGACTC GCTCGCACCC
GAGGCGATCG TCCCGTCACC ACTCGACCCG CGGGTGGCAC CCGCTGTGGC CGAGGCCGTC
GCGGAGGCCG CGCGGCGCGA CGGCGTCACC CGGTAG
|
|---|
| Protein sequence | MSSSTVDPAD PVFRLHRGGK LAVASTVPLT SREDLSLAYT PGVAQVCAAI AADPRLADDY
TWAGHTVAVV TDGSAVLGLG NIGPHAAMPV MEGKAVLFKQ FGGVDAVPIC LNTQDVDEIV
AAVRALAPSF GGINLEDISA PRCFEVERRL DEALDIPVFH DDQHGTAIVV LAALRNAAAL
LNRKLGDLRV AISGAGAAGV AVTRMLVAGG VNPEQVVVCD SRGILGQHRE GLTGTKAELA
ELTNGDGRRG DVAEALRGAD VLIGVSGGQI PEAAVAGMAP GGIVFALANP TPEVHPRVAA
QHVAVVATGR SDHPNQINNV LAFPGVFRGA LDARATRITD GMKVAAADAI AGVVADSLAP
EAIVPSPLDP RVAPAVAEAV AEAARRDGVT R
|
|---|
| |