| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3621 |
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| Symbol | |
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| ID | 5060096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4148968 |
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| End bp | 4150974 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475876 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001160430 |
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| Protein GI | 145596133 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGCGAA CCTACGCCGG GCACAGCTCG GCCGCTGCGA CAAACGCGCT CTTCCGCCGC
AACCTGGCGA AGGGGCAGAC CGGGCTCTCG GTCGCCTTCG ACCTGCCCAC CCAGACCGGG
TACGACCCCG ACCACGAGCT CGCCGCCGGG GAGGTCGGCC GAGTGGGTGT GCCGGTGGCG
CACCTTGGTG ATCTACGGGC TCTCTTCCAG GGTATTCCCC TGGCCGAGAT GAACACCTCG
ATGACCATCA ACGCGCCGGC GATGTGGTTG CTCGGCCTCT ACAGCATCGT CGCCACCGAG
CAGGGTGCGC AGCTCGACCG CTGCGCCGGC ACAACCCAGA ACGACATCAT CAAGGAGTAC
CTGTCCCGCG GCACCTACAT CTTCCCGCCG GCGGTGTCCC TGCGGCTGAC CGCCGACATC
ATCGCGTACA CCCTCGGGGA GATGCCCCGG TGGAATCCGG TCAACATCTG CTCCTACCAC
CTCCAGGAGG CCGGTGCCAC CCCGGTTCAG GAGGTCGGCT TCGCGCTGGC CACCGCGGTC
GCCGTCCTCG ACGCCGTCCG TGACTCCGGC CAGGTGCCGG CCGAGCGGAT GGGAGACGTG
GTCCAGCGGA TGAGCTTCTT CGTCAACGCC GGGGTGCGCT TCGTCGAGGA GATCGCCAAG
ATGCGTGCCT TCGGTGCGCT CTGGGACGAG ATCACCCGCG ACCGGTACGG CGTGGCGAAC
CCGAAGCAGC GCCGGTTTCG CTACGGCGTC CAGGTCAACT CCCTGGGGCT GACCGAGGCG
CAGCCGGAGA ACAACATCCA ACGCATCGTC CTGGAGATGC TCGGCGTGAC CCTCTCCCGG
GACGCGCGGG CCCGGGCGGT GCAGCTCCCA GCCTGGAACG AGGCCCTCGG ACTGCCCCGC
CCGTGGGACC AGCAGTGGTC GCTGCGGATG CAACAGGTGC TCGCGTACGA GTCGGACCTG
TTGGAGTACC CCGACCTGTT CGACGGCTCA CACCTGATGA CGGCGCTGGT CGACGACATC
GTCTCCGGAG CCCGGGTCGA GCTGGAGAAG GTGCTGGAGA TGGGGGGCGT GGTCGCCGCG
GTCGAGACCG GCTACCTGAA GAGCGCCCTG GTCGCCTCGC TCGCCGACCG GCGCCGCCGG
ATCGAGGCCG GCACCGATGT GGTGGTGGGC GTCAACCGGT TCACCGAGAC CGAGCCCTCC
CCGCTGACCG CGGCCGGCGC CGAGGCGATC GAACAGGTCG ATCCGGCGGT GGAGGCGGCC
GCCGCGACCG CCGTAGGCCA CTGGCGGGCC AGCCGGGACG CCGCGGCCGT GGACGCTGCG
CTCGACCAAC TCCGCGAGGA CGCCGCCTCC ACCAGGAACC TGATGTCGGC CACGCTCGAC
TGCGTACGCG CCGGGGTGAC CACCGGTGAG TGGGCGGGCG CGCTGCGAGA GGTTTTCGGG
GAGTACCGGG CCCCGACCGG CCTGTCTGGC GCGGTCGGTT CCGGTGCCGA CGGCCCGCTG
TCGGCGGTCC GGGCCCGGGT CGCCGCCACC GCTCGGCAAC TGGGCGGTGG GCGGCTGCGA
CTGCTGGTCG GCAAGCCCGG TCTGGACGGG CACTCCAACG GCGCCGAGCA GATCGCGGTG
CGAGCCCGTG ACGCCGGCTT CGAGGTGGTC TATCAAGGCA TCCGACTGAC CGCTGGGCAG
ATCGTGGCCG CCGCCGTGGA GGAGGACGTT GACCTGGTCG GCCTCTCCGT TCTCTCCGGC
TCGCACCTTG CGGCTGTGCC GGCTGTCCTG GCGGGGCTGC ATGCCGCCGG ACGGGGTGAT
CTGCCCGTCG TGGTCGGCGG CATCATCCCG GAGACGGACA CGCAGACCCT GCGGGATGCT
GGAGTAGCCC GGGTCTTCAC GCCGAAGGAC TTCGCGCTCA CCGGGGTCAT CGACGAGTTG
GTGACCGTGG TTCGCCACGC CAACGGCCTG CCGGACGAGG AGGATCCTGC GCCGGTTCCC
GGGCGCGACA CCGTGCGCCG GCGCTGA
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| Protein sequence | MMRTYAGHSS AAATNALFRR NLAKGQTGLS VAFDLPTQTG YDPDHELAAG EVGRVGVPVA
HLGDLRALFQ GIPLAEMNTS MTINAPAMWL LGLYSIVATE QGAQLDRCAG TTQNDIIKEY
LSRGTYIFPP AVSLRLTADI IAYTLGEMPR WNPVNICSYH LQEAGATPVQ EVGFALATAV
AVLDAVRDSG QVPAERMGDV VQRMSFFVNA GVRFVEEIAK MRAFGALWDE ITRDRYGVAN
PKQRRFRYGV QVNSLGLTEA QPENNIQRIV LEMLGVTLSR DARARAVQLP AWNEALGLPR
PWDQQWSLRM QQVLAYESDL LEYPDLFDGS HLMTALVDDI VSGARVELEK VLEMGGVVAA
VETGYLKSAL VASLADRRRR IEAGTDVVVG VNRFTETEPS PLTAAGAEAI EQVDPAVEAA
AATAVGHWRA SRDAAAVDAA LDQLREDAAS TRNLMSATLD CVRAGVTTGE WAGALREVFG
EYRAPTGLSG AVGSGADGPL SAVRARVAAT ARQLGGGRLR LLVGKPGLDG HSNGAEQIAV
RARDAGFEVV YQGIRLTAGQ IVAAAVEEDV DLVGLSVLSG SHLAAVPAVL AGLHAAGRGD
LPVVVGGIIP ETDTQTLRDA GVARVFTPKD FALTGVIDEL VTVVRHANGL PDEEDPAPVP
GRDTVRRR
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