Gene Strop_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3570 
Symbol 
ID5060045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4089844 
End bp4090995 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID640475825 
Producthypothetical protein 
Protein accessionYP_001160379 
Protein GI145596082 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.364356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTC GTACTCTGCT CCGAGCTGGC GTCGCCGGTG GCGCCGCGGC CTTCTCCGGC 
AGCCTCTGGG CTGGTGCCGC GCTGGCCGAC CCCGCCCAGC CCGGCGAGAG CCCCTACGGA
CCCCTTCAGT CGGCCGACGC CCTGGGCATC CAGCTACCCG TGGGATTCGC CAGTCGGGTG
GTGGCCCGGT CCCGGCAGTC CGTTACTGGT ACCGCATACA CCTGGCACGA CGCGCCCGAC
GGCGGCGCCT GCTTCGCCGC CGGTGCCGGC TGGATCTACG TCTCGAACTC GGAGATCACT
CCCGGTGGTG GCGCGTCGGC GATCCGATTC GACGCCGACG GCAGCATCGC CTCGGCCTAC
CAGATCCTGT CGGGCACCCG GCAGAACTGC GCGGGTGGGG CGACACCGTG GGAGACGTGG
CTCTCCTGCG AGGAGGTCCG CCGCGGCTAC GTCTACGAGA CCTACCCCCA GGGCGGCGCG
ACCGCCATCC GGCGAGACGC GATGGGTCGG TTCAAGCACG AGGCCGCGGC CTGCGACCCG
GACCGACAGG TGATCTACCT CACCGAGGAC GAGAGTGACG GCTGCCTCTA CCGGTTCCGG
CCGATGACCT GGGGGGACCT TTCGGCCGGC ACCCTGGAGG TACTGGTGGC GGGCACCGCC
ACCAGCGGCC CGGTGGCCTG GGCCCCGGTG CCCGACCCGG ACGGCTGGCC GAGGTACACC
CGAGACCAGG TCTCCGGGGC GAAGCGGTTC AACGGCGGTG AGGGCTGCTG GTACGCCGAC
GGGACCTGTT GGTTCACCAC GAAGGGGGAC AACCGGGTCT GGGCCTACGA CGCGGTCAAC
GAGCGCATCG ACCTGGCGTA CGACGACTCG TTGGTCTCCG GCACCGCACC GCTGACCGGG
GTGGACAACA TCACGGGTAC CCCCGGCGGT GACCTCTACG TCGCCGAGGA CGGTGGCAAT
ATGGAGATCA ACATCATCAC ACCGGACGAG GTCGTCGCCC CGTTCCTGCG GATCACGGGT
CAGTCCTGGT CGGAGATCTG CGGTCCGGCG TTCTCCCCCG ACGGCACGCG GTTCTACTTC
TCGTCCCAGC GCGGAACCTC CGGATGGTCC TCCGGTGGCA TCACCTACGA GGTGCGCGGC
CCGTTCCGCT GA
 
Protein sequence
MDRRTLLRAG VAGGAAAFSG SLWAGAALAD PAQPGESPYG PLQSADALGI QLPVGFASRV 
VARSRQSVTG TAYTWHDAPD GGACFAAGAG WIYVSNSEIT PGGGASAIRF DADGSIASAY
QILSGTRQNC AGGATPWETW LSCEEVRRGY VYETYPQGGA TAIRRDAMGR FKHEAAACDP
DRQVIYLTED ESDGCLYRFR PMTWGDLSAG TLEVLVAGTA TSGPVAWAPV PDPDGWPRYT
RDQVSGAKRF NGGEGCWYAD GTCWFTTKGD NRVWAYDAVN ERIDLAYDDS LVSGTAPLTG
VDNITGTPGG DLYVAEDGGN MEINIITPDE VVAPFLRITG QSWSEICGPA FSPDGTRFYF
SSQRGTSGWS SGGITYEVRG PFR