| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3535 |
|---|
| Symbol | |
|---|
| ID | 5060009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4051824 |
|---|
| End bp | 4052357 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640475789 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001160344 |
|---|
| Protein GI | 145596047 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1403] Restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACA TACGACCCAC GGTGGGCTCC GGCGCGCTGG TCCTCAACGC CACCTACGAG
CCCCTGTGTG TCGTGTCGGT CCGGCGTGCG GCGATCCTGG TGCTCACCGC CAAGGCTGTC
TGCGTCGCCG ATGGTGACGG CGTCCTGCAC AGCGCCCGCG ACTCGCTGCC GGTGCCCTCG
GTCGTCCGGC TCACCCGCTT CGTCCGGGTG CCGTTTCGGG CCCACGTCGG GCTGTCCCGG
CGGGCGATCT TCGCGCGGGA CGGGTGGCGT TGCGCCTACT GCCGGGGCCC GGCGGAGACC
ATCGATCATG TCCTCCCGCG GAGCCGCGGT GGTCGGCACT CCTGGGAGAA CGTGGTGGCG
GCGTGCGCCC GGTGCAACCA CACCAAGGGC GACAAGACGC CGGCCGAACT GGGCTGGCGG
CTCCCCGCCC CGCCGACGGC GCCGAAAGGC ATCGCATGGC GGGTACTCGG CCACCGACCT
CCCGACCCGC GTTGGGTCGA CTGGCTCGAC CTGCGCGAGC CCGAAGCCGC CTGA
|
|---|
| Protein sequence | MPDIRPTVGS GALVLNATYE PLCVVSVRRA AILVLTAKAV CVADGDGVLH SARDSLPVPS
VVRLTRFVRV PFRAHVGLSR RAIFARDGWR CAYCRGPAET IDHVLPRSRG GRHSWENVVA
ACARCNHTKG DKTPAELGWR LPAPPTAPKG IAWRVLGHRP PDPRWVDWLD LREPEAA
|
|---|
| |