Gene Strop_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3496 
Symbol 
ID5059968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4015393 
End bp4016205 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID640475748 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001160305 
Protein GI145596008 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG CGGTCTGCCA GTTGAACGCC CAGGAGGACC AAGCGAGGAA TCTGGTGGCC 
GCCAAGGCCC TGCTGGAGCG GGCGGCGGCC GGTGGTGCCG ATCTCGCGAT CCTCCCCGAG
TATGTCGACT ATCTCGGTCC GGTCGCCGGG CAACCGGTGG CGGAGCCGGT GGACGGGGAG
GTCGGGCGGT TCTTCGCCGA TGCCGCGCAG CGGCTCGGTG TCTGGGTCGT CGTTGGCTCG
ATCCACGAGC GAGGCCCGGA CCCGGAGCAT TCGTACAACA CCTGCCTGGT GTTTGATCGA
TCCGGGACGC TCGCCGCCAG CTATCGCAAG ATCCACCTGT ACGACGTGGA GATTCCCGGC
CGGGTGTCGT ATCTGGAGTC AGCCACTGTC GCCGCGGGCG CGCAGCCGGT CGTCGTTGAC
GTGGAGGGCA TTCGGGTCGG GCTGTCGATC TGCTACGACC TCCGTTTTCC CGAGCTCTAC
CGCCAGCTCG TCACGGACGG CGGGGCGGAC CTCCTTCTCG TCCCGGCAGC CTTCATGCTG
CACACGGGAA GGGACCACTG GGAGGTGCTG TTGCGCGCCC GGGCCATCGA GAACCAGTGC
TTCGTTGCGG CTGCTGCCCA GACGGGGGAC CACGAGCCAA GACGTACCTG CTTCGGGCGC
AGCATGGTGA TAGACCCCTG GGGAACGGTG CTCGCCCAGG TGCCGGATGG TTCCGGGCTC
GCGATCGTCG ACCTTGACCT GGAGCGACTG CGGACGATCC GGGCCGAGTT GCCGAGCCTG
GCCAACCGTC GTCTCCAGCC TTCATGGGCA TGA
 
Protein sequence
MRVAVCQLNA QEDQARNLVA AKALLERAAA GGADLAILPE YVDYLGPVAG QPVAEPVDGE 
VGRFFADAAQ RLGVWVVVGS IHERGPDPEH SYNTCLVFDR SGTLAASYRK IHLYDVEIPG
RVSYLESATV AAGAQPVVVD VEGIRVGLSI CYDLRFPELY RQLVTDGGAD LLLVPAAFML
HTGRDHWEVL LRARAIENQC FVAAAAQTGD HEPRRTCFGR SMVIDPWGTV LAQVPDGSGL
AIVDLDLERL RTIRAELPSL ANRRLQPSWA