Gene Strop_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3372 
Symbol 
ID5059839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3868447 
End bp3868902 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID640475621 
Producthypothetical protein 
Protein accessionYP_001160183 
Protein GI145595886 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCGGC GTCACAGGTC GGCCACGCCG GCTGCGGGCA GAATCCACAC CATGCATACC 
GAGGTGATAA CAGTGCAGAC CGGCTCGCGC CTCACCGTCC GGAACATCAC CACCGAGGCG
GACCGGTTCG TGGCCGGACA GGGGGACGGC CTGCTGCACG TCTTCGTGCC CCACACCACC
GCCGGGCTCG CGCTCATCGA GTTCGGTTCT GGGTCCGACG ACGATCTACG CCGGGTGCTC
AACGACCTGC TGCCCTCCGA CGACCGGTGG CGACACCGGC ACGGGGCCCC CGGCCATGGG
CGGGACCATC TGTTGCCCGC CTTCCTGTCG CCGTACGCGA CGCTTCCGGT GTGTGACGGG
CGGCTCGTGC TCGGCGCCTG GCAGTCGCTG TGCCTGGTTG ACCCGAACGG AGACAACCCG
ACACGCCAGG TCCGCTTCTC GTTCCTGCCC GGCTGA
 
Protein sequence
MSRRHRSATP AAGRIHTMHT EVITVQTGSR LTVRNITTEA DRFVAGQGDG LLHVFVPHTT 
AGLALIEFGS GSDDDLRRVL NDLLPSDDRW RHRHGAPGHG RDHLLPAFLS PYATLPVCDG
RLVLGAWQSL CLVDPNGDNP TRQVRFSFLP G